Shigella flexneri 8401 (serotype 5b): SFV_2752
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Entry
SFV_2752 CDS
T00377
Symbol
ygbB
Name
(GenBank) conserved hypothetical protein
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Pathway
sfv00900
Terpenoid backbone biosynthesis
sfv01100
Metabolic pathways
sfv01110
Biosynthesis of secondary metabolites
Module
sfv_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SFV_2752 (ygbB)
Enzymes [BR:
sfv01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
SFV_2752 (ygbB)
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GFIT
Motif
Pfam:
YgbB
DUF6630
Motif
Other DBs
NCBI-ProteinID:
ABF04838
UniProt:
Q0T1H7
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All DBs
Position
2820101..2820580
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AA seq
159 aa
AA seq
DB search
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKL
FPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDL
GCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattggacacggttttgacgtacacgcctttggcggtgaaggcccaattatcatt
ggtggcgtacgcattccttacgaaaaaggattgctggcgcattctgatggcgacgtggcg
cttcatgcgttgaccgatgcattgcttggcgcggcggcgctgggggatatcggcaaactg
ttcccggataccgatccggcatttaaaggtgccgacagccgcgagctgctacgcgaagcc
tggcgtcgtattcaggcgaagggttatacccttggcaacgtcgatgtcactatcatcgct
caggcaccgaagatgttgccgcacattccacaaatgcgcgtgtttattgccgaagatctc
ggctgccatatggatgatgttaacgtgaaagccactactacggaaaaacttggatttacc
ggacgtggggaagggattgcctgtgaagcggtggcgctactcattaaggcaacaaaatga
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