Shigella flexneri 8401 (serotype 5b): SFV_2796
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Entry
SFV_2796 CDS
T00377
Symbol
ygaA
Name
(GenBank) putative 2-component transcriptional regulator
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfv03000
]
SFV_2796 (ygaA)
Transcription factors [BR:
sfv03000
]
Prokaryotic type
Helix-turn-helix
Other families
SFV_2796 (ygaA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
GAF_2
Mg_chelatase
AAA_5
MCM
AAA
GAF_3
AAA_16
AAA_2
AAA_19
AAA_22
HTH_8
AAA_30
DBD_HTH
Motif
Other DBs
NCBI-ProteinID:
ABF04881
UniProt:
Q0T1D4
LinkDB
All DBs
Position
2864736..2866250
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AA seq
504 aa
AA seq
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MSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALLRYDSRQFIPLAIDGLA
KDVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDGLIPGQESLKVHACVGLPLFV
GQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNALLIEQLESQNMLPGDATPFE
AVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEASPRAVNPLV
YLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLL
RVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSVFPLSVPPLRE
RGDDVILLAGYFCEQCRLRQGLSRVVLSAGARNLLQHYSFPGNVRELEHAIHRAVVLARA
TRNGDEVILEAQHFAFPEVTLPPPEAAAVPVVKQNLREATEAFQRETIRQALAQNHHNWA
ACARMLETDVANLHRLAKRLGLKD
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttccgttgatgtgctggcgaatatcgccatcgaattgcagcgtgggattggt
catcaggatcgttttcagcgcctgatcaccacgctacgtcaggtgctggagtgcgatgcg
tctgcgttgctacgttacgattcgcggcagtttattccgcttgccatcgacggtctggca
aaggatgtactcggtagacgctttgcgctggaagggcatccacggctggaagcgattgcc
cgcgccggggatgtggtgcgctttcccgcagacagcgaattgcccgatccctatgacggt
ttgattcctgggcaggagagtctgaaggttcacgcctgcgttggtctgccattgtttgtc
ggacaaaacctgatcggcgcactgacgctcgacgggatgcagcccgatcagttcgatgtt
ttcagcgacgaagagttacggctgattgccgcgctggcggcgggagcgttaagcaatgcg
ttgctgattgaacaactggaaagccagaatatgctgccaggcgatgccacgccgtttgaa
gcggtgaaacagacgcagatgattggcttgtcccctggcatgacgcaactgaaaaaagag
attgagattgtggcggcgtccgatctcaacgttctgatcagcggtgagacgggaaccggt
aaggagctggtggcgaaagcgattcatgaagcctcgccacgggcggtgaatccgctggtc
tatctcaactgtgccgcactgccggaaagtgtggcggaaagtgagttgttcgggcatgtg
aaaggagcgtttactggcgctatcagtaaccgcagcgggaagtttgaaatggcggataac
ggtactctgtttctcgatgagatcggcgagttgtcgttggcattgcaggccaagctgctg
agggtgttgcagtatggcgatattcagcgcgttggcgatgaccgtagtttgcgggtcgat
gtgcgcgtgctggcggcgactaaccgcgacttacgcgaagaggtgctggcagggcgattc
cgcgccgatttgtttcatcgcctgagcgtgtttccactttcggtgccgccgctgcgtgag
cggggcgatgatgtcattctgctggcggggtatttctgcgagcagtgtcgtttgcggcag
gggctctcccgcgtggtattaagtgccggggcgcgaaatttactgcaacactacagtttt
ccgggaaacgtgcgcgaactggaacatgctattcatcgggcggtagtgctggcgagagcc
acccgcaacggcgatgaagtgattcttgaggcgcaacattttgcttttcctgaggtgacg
ttgccgccgccagaagcggcggcggtgcccgttgttaagcaaaacctgcgtgaagcgaca
gaagcgttccagcgtgaaactattcgccaggcactggcacaaaatcatcacaactgggca
gcctgtgcgcgaatgctggaaactgacgtcgccaacctgcatcggctggcgaaacgtctg
ggattgaaggattaa
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