Shigella flexneri 8401 (serotype 5b): SFV_3024
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Entry
SFV_3024 CDS
T00377
Symbol
speC
Name
(GenBank) ornithine decarboxylase isozyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Pathway
sfv00330
Arginine and proline metabolism
sfv00480
Glutathione metabolism
sfv01100
Metabolic pathways
sfv01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SFV_3024 (speC)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SFV_3024 (speC)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SFV_3024 (speC)
Enzymes [BR:
sfv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
SFV_3024 (speC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ABF05093
UniProt:
Q0T0S2
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Position
complement(3086909..3089104)
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AA seq
731 aa
AA seq
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MGQGFPPCPVFLLPRNGFALMKSMNIAASSELVSRLSSHRRVVALGDTDFTDVAAVVITA
ADSRSGILALLKRTGFHLPVFLYSEHAVELPAGVTAVINGNEQQWLELESAACQYEENLL
PPFYDTLTQYVEMGNSTFACPGHQHGAFFKKHPAGRHFYDFFGENVFRADMCNADVKLGD
LLIHEGSAKDAQKFAAKVFHADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNH
HGALIQAGTTPVYLEASRNPFGFIGGIDAHCFNEEYLRQQIRDVAPEKADLPRPFRLTII
QLGTYDGTVYNARQVIDTIGHLCDYILFDSAWVGYEQFISMMADSSPLLLELNENDPGIF
VTQLVHKQQAGFSQTSQIHKKDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVN
AKIHEGESGRRLWAECVELGIESRKAILARCKLFRPFIPPVVDGKLWQDYPTSVLASDRR
FFSFEPGAKWHGFEGYAADQYFVDPCKLLLTTPGINAETGEYSDFGVPATILAHYLRENG
IVPEKCDLNSILFLLTPAESHENLAQLVAMLAQFEQHIEDDSSLAEVLPSVYNKYPVRYR
DYTLRQLCQEMYDLYVSFDVKDLQKAMFRQQSFPSVVMNPQDAHSAYIRGEVELVRIRDA
EGRIAAEGALPYPPGVLCVVPGEVWGGAVQRYFLALEEGVNLLPGFSPELQGVYSETDAD
GMKRLYGYVLK
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggggcagggttttccaccttgtccggtattcttacttccccgaaacgggtttgcgctt
atgaaatcaatgaatattgccgccagtagtgaactggtatcccgactttcttctcatcgc
cgcgtggtggcgttgggagatactgattttacggacgtcgcggcagtcgtcattaccgct
gcggatagtcgcagtggcattcttgcgttgcttaagcgcaccggttttcatctaccggtg
tttttgtattccgaacatgctgttgaattacctgcgggcgttacggcggtaatcaacggc
aacgagcagcagtggctggagctggaatccgcagcctgtcagtatgaagagaatttgctg
ccaccgttttatgacacgctgacgcagtacgttgagatgggcaacagcacctttgcttgc
cctggacatcaacatggtgcgttctttaaaaagcatcctgccggacgccatttttacgat
ttctttggtgagaacgtctttcgcgccgatatgtgtaacgctgacgtaaaattgggcgat
ctgcttattcatgaaggatcggcgaaagatgcgcagaaattcgcagccaaagtctttcat
gccgataaaacctattttgtgctgaacggcacatcggcagcgaataaagtggtgacgaat
gcgctgttaacgcgtggcgatctggtgctcttcgaccgtaacaaccataagtcgaatcat
cacggcgcgctgattcaggcggggacgacgccggtctatctggaagcttcacgtaacccg
tttggtttcattggcggtattgatgcgcactgttttaatgaagagtatctgcgccagcaa
attcgcgacgttgcgccagaaaaagccgacctgccgcgcccgtttcgcctgacgattatt
cagctgggaacctatgacggcactgtctataacgcccgtcaggtgatcgataccattggg
catctgtgtgattacattctgtttgattccgcgtgggtcggttacgaacagtttatctcg
atgatggcggatagctcgccgctgctgttagaacttaacgaaaacgatccggggattttt
gtgacccagttggtgcacaaacagcaggctggattctcacagacgtcgcagatccataaa
aaagataaccatatccgcggacaggcgcgtttttgcccgcataagcggttgaataacgcc
tttatgctccatgcttctaccagccctttctatccgctgtttgctgcactggatgttaac
gccaaaattcatgaaggggagagtgggcgtcggctgtgggctgagtgcgttgagttgggt
attgagtcgcgcaaggctattcttgcgcgctgtaagctgttccgcccgtttatcccgccc
gttgttgatggcaaattgtggcaggattatccgacatcagtgttagccagcgaccgccgt
tttttcagttttgagccgggggcgaagtggcacggctttgaaggatatgccgcggatcag
tattttgttgatccgtgcaagctgttactcactacaccaggtatcaatgccgaaaccggc
gaatatagcgactttggcgttccggcgacgattctggcgcactatctgcgtgagaacggc
attgtgccggagaagtgcgatctcaactccattctgttcttattaactccggcggaaagc
cacgagaatctggcacaactggtggcgatgctggcgcaatttgaacagcatattgaggat
gactcgtcgctggctgaggtgttgccgagcgtttataacaaatatccggtgcgctatcgc
gactacaccctgcgccagttgtgtcaggagatgtacgatctgtatgtcagtttcgacgtc
aaagacctacaaaaagcgatgttccgccagcagagtttcccgtcagtggtgatgaacccc
caggatgcgcatagcgcttatattcgcggtgaagtggagttggtgcggattcgtgatgcc
gaagggcgaattgcggcagaaggggcgttgccttatccacctggcgtgctttgcgtggta
cccggggaagtctggggtggggcggttcaacgttatttccttgcgctggaagaaggcgtg
aatttgttgccgggattttcgccggagttgcaaggtgtctatagcgaaaccgatgcggat
ggcatgaaacgattgtacggttatgtgttgaagtaa
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