Shigella flexneri 8401 (serotype 5b): SFV_3050
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Entry
SFV_3050 CDS
T00377
Name
(GenBank) putative hydrogenase subunit
KO
K06282
hydrogenase small subunit [EC:
1.12.99.6
]
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Pathway
sfv00633
Nitrotoluene degradation
sfv01120
Microbial metabolism in diverse environments
sfv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00633 Nitrotoluene degradation
SFV_3050
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SFV_3050
Enzymes [BR:
sfv01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.99 With unknown physiological acceptors
1.12.99.6 hydrogenase (acceptor)
SFV_3050
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Motif
Pfam:
Oxidored_q6
NiFe_hyd_SSU_C
DUF5678
Motif
Other DBs
NCBI-ProteinID:
ABF05115
UniProt:
Q0T0Q0
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Position
complement(3114289..3115353)
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AA seq
354 aa
AA seq
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MKLCAALAATMGLSSKAAAEMAESVTNPQRPPVIWIGAQECTGCTESLLRATHPTVENLV
LETISLEYHEVLSAAFGHQVEENKHNALEKYKGQYVLVVDGSIPLKDNGIYCMVAGEPIV
DHIRKAAEGAAAIIAIGSCSAWGGVAAAGVNPTGAVSLQEVLPGKTVINIPGCPPNPHNF
LATVAHIITYGKPPKLDDKNRPTFAYGRLIHEHCERRPHFDAGRFAKEFGDEGHREGWCL
YHLGCKGPETYGNCSTLQFCDVGGVWPVAIGHPCYGCNEKGIGFHKGIHQLANVENQTPR
SQKPDVNAKEGGNVSAGAIGLLGGVVGLVAGVSVMAVRELGRQQKKDNADSRGE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttgtgcagcattagccgccaccatggggttaagtagcaaagccgctgcagag
atggccgaatcggttactaacccgcagcgtccgccagttatctggattggcgcgcaggag
tgcaccggttgtacggaatctctgcttcgtgcaacgcatccaacggtagaaaacctcgtg
ctggagactatctctctggaatatcacgaagtgctttccgccgccttcggtcatcaggtc
gaagagaacaaacataacgctctcgagaagtacaaagggcagtatgtgttagtggtggat
ggttccatcccattaaaagataacggtatttattgcatggttgccggtgagccgattgtg
gatcacatccgcaaagcggcggaaggcgcagcagccattatcgctattggttcctgctcc
gcgtggggcggtgttgccgcagctggagttaacccaactggcgcagtcagcttgcaagaa
gttctgccaggcaaaaccgttatcaatattccgggctgcccgccgaacccgcacaacttc
ctcgcgaccgttgcgcacatcatcacttacggcaaaccgccgaaactggatgacaaaaac
cgtccgaccttcgcctatggccgtctgattcacgaacactgcgaacgtcgcccgcacttc
gatgctggtcgttttgccaaagagttcggtgatgaaggccaccgcgaaggctggtgcctg
taccacctcggctgtaaagggccagaaacttacggcaactgctcaacgctgcaattctgc
gatgttggcggtgtgtggccggtggcgattggtcacccgtgctatggctgtaacgaaaaa
ggtatcggcttccataaaggcatccatcagcttgccaacgtcgaaaatcagactccgcgt
tcacagaaaccggatgttaacgctaaagagggcggcaacgtctctgcaggcgctattggt
ttgctcggcggtgtggttgggctggttgccggtgtcagcgtgatggcggtgcgtgaactg
ggtcgtcagcaaaagaaagataacgctgactcacggggagaataa
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