Shigella flexneri 8401 (serotype 5b): SFV_3159
Help
Entry
SFV_3159 CDS
T00377
Symbol
tdcA
Name
(GenBank) transcriptional activator of tdc operon
KO
K07592
LysR family transcriptional regulator, tdc operon transcriptional activator
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfv03000
]
SFV_3159 (tdcA)
Transcription factors [BR:
sfv03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SFV_3159 (tdcA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Cro
HVO_A0261_N
I-HmuI_NUMOD-like
ACT_9
HTH_28
HTH_3
Stonustoxin_helical
Motif
Other DBs
NCBI-ProteinID:
ABF05215
LinkDB
All DBs
Position
complement(3232563..3233501)
Genome browser
AA seq
312 aa
AA seq
DB search
MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIINDIEDYFGVELVVRKNTG
VTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFGFPSLIGFTFMSGMINKFK
EVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKLQDLHVEPLFESEFVLVASKS
RTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNGISIENIVKTDSVVTIYNLVLNA
DFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAVWSKNYRIKKAASVLVELAKEYSSY
NGCRRRQLIEVG
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgagcactattcttcttccgaaaacgcagcacctggtagtctttcaggaagtcattaga
agtggctctatcggctcggctgcaaaagaattagggttaactcaaccggccgtcagtaaa
atcattaacgatattgaagattattttggtgtggaattagtggtgcggaaaaataccggt
gtaacattaacacctgccggtcaattgttactctcccgttccgaatccattacccgtgaa
atgaaaaatatggttaatgagataagcggtatgtcttctgaagcggtggtggaagtctca
tttggttttccttcattgattggttttacttttatgtcagggatgatcaacaagttcaaa
gaggtgttcccgaaagcgcaggtttctatgtatgaagcgcaactgtcttcgttcttaccg
gcaatccgcgacggtcgactggattttgcgattggtacgttaagtgcagaaatgaagctt
caggatttacatgttgagccgctgttcgagtccgagtttgtgctggtagccagtaagtcc
cgaacatgcaccggcaccaccacgctggagtcgttgaagaacgaacagtgggtgttgcca
caaactaatatggggtactacagcgaactgcttactacgttacaaagaaatggcatcagt
attgaaaacatcgttaaaaccgactcagtcgtgacaatttataatcttgttctcaatgct
gatttcttaactgtaattccttgtgatatgacgtcaccttttggttctaatcaatttatt
actattccggttgaagaaacattacctgtggcacaatatgccgcggtatggtcgaaaaat
tatcgtattaaaaaagcagcatcggttttggtggaattagccaaagagtattcatcttat
aatgggtgtagacgaaggcaattaatagaagttggttag
DBGET
integrated database retrieval system
