Shigella flexneri 8401 (serotype 5b): SFV_3176
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Entry
SFV_3176 CDS
T00377
Symbol
yraL
Name
(GenBank) conserved hypothetical protein
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfv03009
]
SFV_3176 (yraL)
Enzymes [BR:
sfv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
SFV_3176 (yraL)
Ribosome biogenesis [BR:
sfv03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SFV_3176 (yraL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
MRM3-like_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ABF05230
UniProt:
Q0T0D5
LinkDB
All DBs
Position
complement(3248339..3249199)
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AA seq
286 aa
AA seq
DB search
MKQHQSADNSQGQLYIVPTPIGNLADITQRTLEVLQAVDLIAAEDTRHTGLLLQHFGINA
RLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTPLINDPGYHLVRTCREAGIRVVPLP
GPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIEAEPRTLIFYESTHRLLDSLE
DIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIVEGHKAQEE
DLPADALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaacaccaatcggcggataattctcagggccagctttacattgtaccgacgcca
atcggcaatctggcggatatcacccagcgtacgttagaggtattacaggccgttgatctg
attgccgccgaggatactcgtcacaccggtttattgctgcaacattttgggattaatgcc
cggttgtttgcgctgcacgaccataacgaacaacaaaaagccgaaacgctgctggcgaag
ctgcaagaggggcaaaacattgcgctggtttccgatgccggaacgccgctaattaacgat
cctggctaccatctggtgcgtacctgccgtgaagcggggattcgtgtggtgccgctaccc
ggaccgtgtgctgctatcactgcgttaagcgccgcgggtttaccatctgaccgtttctgt
tacgaaggctttttacctgccaaatcaaaaggccgccgtgatgcgctaaaagccattgaa
gcggagccgcgcacgctgattttttatgaatctacccaccgtctgttagatagcctggaa
gatatcgttgcggtattaggcgaatcccgctacgtggttctggcgcgtgagctgaccaaa
acctgggaaaccattcacggcgcgcccgttggcgagctgctggcgtgggtaaaggaagat
gaaaaccgtcgcaaaggcgaaatggtgctgattgtcgaaggtcataaagcacaggaagaa
gacttacccgccgatgccctgcgcacgctggcgctgctacaggcagaactgccgctgaaa
aaagcggcggcgctggccgcagaaattcatggcgtgaagaaaaatgcgctgtataagtat
gcgctggagcagcaggggtaa
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