Entry |
|
Symbol |
dapF
|
Name |
(GenBank) diaminopimelate epimerase
|
KO |
|
Organism |
sfv Shigella flexneri 8401 (serotype 5b)
|
Pathway |
sfv01110 | Biosynthesis of secondary metabolites |
sfv01120 | Microbial metabolism in diverse environments |
|
Module |
sfv_M00016 | Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine |
|
Brite |
KEGG Orthology (KO) [BR:sfv00001]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SFV_3690 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SFV_3690 (dapF)
Enzymes [BR:sfv01000]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SFV_3690 (dapF)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(3776371..3777195)
|
AA seq |
274 aa
MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE
PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE
SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLDEEVRV
ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL |
NT seq |
825 nt +upstreamnt +downstreamnt
atgcagttctcgaaaatgcatggccttggcaacgattttatggtcgtcgacgcggtaacg
cagaatgtctttttttcaccggagctgattcgtcgcctggcggatcggcacctgggggta
gggtttgaccagctgctggtggttgagccgccgtatgatcctgaactggattttcactat
cgcattttcaatgctgatggcagtgaagtggcgcagtgcggtaacggtgcgcgctgcttt
gcccgttttgtgcgtctgaaaggactgaccaataagcgtgatatccgcgtcagcaccgcc
aacgggcggatggttctgaccgtcaccgatgatgatctggtccgcgtaaatatgggcgaa
cccaacttcgaaccttccgccgtgccgtttcgcgctaacaaagcggaaaagacctatatt
atgcgcgccgccgagcagacaatcttatgcggcgtggtgtcgatgggaaatccgcattgc
gtgattcaggtcgatgatgtcgataccgcggcggtagaaacgcttggtcctgttctggaa
agtcacgagcgttttccggagcgcgccaatatcggttttatgcaagtggttaagcgcgag
catattcgtttacgcgtttatgagcgtggggcaggagaaacccaggcctgcggcagcggc
gcgtgtgcggcggtggcggtagggattcagcaaggtttgctggacgaagaagtacgcgtg
gaactccccggcggtcgtcttgatatcgcctggaaaggtccgggtcacccgttatatatg
actggcccggcggtacatgtctacgacggatttattcatctatga |