Shigella flexneri 8401 (serotype 5b): SFV_3807
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Entry
SFV_3807 CDS
T00377
Symbol
yidC
Name
(GenBank) 60 kDa inner-membrane protein
KO
K03217
YidC/Oxa1 family membrane protein insertase
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Pathway
sfv02024
Quorum sensing
sfv03060
Protein export
sfv03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SFV_3807 (yidC)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SFV_3807 (yidC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SFV_3807 (yidC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sfv03029
]
SFV_3807 (yidC)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sfv02044
]
SFV_3807 (yidC)
Mitochondrial biogenesis [BR:
sfv03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
SFV_3807 (yidC)
Secretion system [BR:
sfv02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SFV_3807 (yidC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YidC_periplas
60KD_IMP
Motif
Other DBs
NCBI-ProteinID:
ABF05820
UniProt:
Q0SYP5
LinkDB
All DBs
Position
complement(3900163..3901758)
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AA seq
531 aa
AA seq
DB search
MIWQAWEQDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKLISVKTDVLDLTINTRGG
DVEQALLPAYPKELNSTQPFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDA
YVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEISSFGQLK
QSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIADNENLNISSKGGWVAMLQ
QYFATAWIPHNDGTNNFYTANLGNGIVAIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKM
AAVAPHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQY
TSMAKMRMLQPKIQAMRERLGDDKQRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALY
YMLMGSVELRQAPFALWIHDLSAQDPYYILPILMGVTMFFIQKMSPTTVTDPMQQKIMTF
MPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLHSREKKKS
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgatctggcaagcctgggagcaggataaaaacccgcaacctcaggcccaacagaccacg
cagacaacgaccaccgcagcgggtagcgccgccgaccagggcgtaccggccagtggccag
gggaaactgatctcggttaagaccgacgtgcttgatctgaccatcaacacccgtggtggt
gatgttgagcaagctctgctgcctgcttacccgaaagagctgaactctacccagccgttc
cagctgttggaaacttcaccgcagtttatttatcaggcacagagcggtctgaccggtcgt
gatggcccggataacccggctaacggcccgcgtccgctgtataacgttgaaaaagacgct
tatgtgctggctgaaggtcaaaacgaactgcaggtgccgatgacgtataccgacgcggca
ggcaacacgtttaccaaaacgtttgtcctgaaacgtggtgattacgctgtcaacgtcaac
tacaacgtgcagaacgctggcgagaaaccgctggaaatctcctcgtttggtcagttgaag
caatccatcactctgccaccgcatctcgataccggaagcagcaacttcgcactgcacacc
ttccgtggcgcggcgtactccacgcctgacgagaagtatgagaaatacaagttcgatacc
attgccgataacgaaaacctgaacatctcttcgaaaggtggttgggtggcgatgctgcaa
cagtatttcgcgacggcgtggatcccgcataacgacggtaccaacaacttctataccgct
aatctgggtaacggcatcgtcgctatcggctataaatctcagccggtactggttcagcct
ggtcagactggcgcgatgaacagcaccctgtgggttggcccggaaatccaggacaaaatg
gcagctgttgctccgcacctggatctgaccgttgattacggttggttgtggttcatctct
cagccgctgttcaaactgctgaaatggatccatagctttgtgggtaactggggcttctcc
attatcatcatcacctttatcgttcgtggcatcatgtacccgctgaccaaagcgcagtac
acctccatggcgaagatgcgtatgctgcagccgaagattcaggcaatgcgtgagcgtctg
ggcgatgacaaacagcgtatcagtcaggaaatgatggcgctgtacaaagctgagaaggtt
aacccgctgggcggctgcttcccgctgctgatccagatgccaatcttcctggcgttgtac
tacatgctgatgggttccgttgaactgcgtcaggcaccgtttgcactgtggatccacgac
ctgtcggcacaggacccgtactacatcctgccgatcctgatgggcgtaacgatgttcttc
attcagaagatgtcgccgaccactgtgaccgacccgatgcagcagaagatcatgaccttt
atgccggtcatcttcaccgtgttcttcctgtggttcccgtcaggtctggtactgtactat
atcgtcagcaacctggtaaccattattcagcagcagctgatttaccgtggtctggaaaaa
cgtggcctgcatagccgcgagaagaaaaaatcctga
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