Shigella flexneri 8401 (serotype 5b): SFV_3943
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Entry
SFV_3943 CDS
T00377
Symbol
selB
Name
(GenBank) selenocysteinyl-tRNA-specific translation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sfv03012
]
SFV_3943 (selB)
Translation factors [BR:
sfv03012
]
Eukaryotic type
Elongation factors
SFV_3943 (selB)
Prokaryotic type
SFV_3943 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_SelB
GTP_EFTU
WHD_2nd_SelB_bact
WHD_1st_3rd_SelB
WHD_3rd_SelB
WHD_2nd_SelB
GTP_EFTU_D2
MMR_HSR1
RsgA_GTPase
GTP_EFTU_D4
HrcA
SRPRB
Motif
Other DBs
NCBI-ProteinID:
ABF05951
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Position
4045504..4047348
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AA seq
614 aa
AA seq
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MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVPGFIDVPG
HEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEA
RVDEVERQVKEVLREYGFAEAKLFITAATEGRGIDALREHLLQLPEREHASQHSFRLAID
RAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRVRALHAQNQPTETANAGQRIALD
IAGDAEKEQINRGDWLLADVPPEPFTRVIVELQTHAPLTQWQPLHIHHAASHVTGRVSLL
EDNLAELVFDTPLWLADNDRLVLRDISARNTLAGARVVMLNPPRRGKRKPEYLQWLASLA
RAQNDSEALAVHLQRGAVNLPDFAWARQLNGEGMRELLQQPGYIQAGYSLLNAPVAARWQ
RKILDTLATYHEQHRDEPGPGRERLRRMALPMEDEALVLLLIEKMRESGDILSHHGWLHL
PDHKAGFSEEQQAIWQKAEPLFGDEPWWVRDLAKETGTDEQAMRLTLRQAAQQGIITAIV
KDRYYRNDRIVEFANMIRDLDQECGSTCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRG
NDHLLRDALLFPEK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgattattgcgactgccggacacgttgaccacggcaaaacaaccttattgcaggcgatt
actggcgtaaatgctgaccgtctgccggaagaaaaaaagcgcggcatgaccatcgatctc
ggctatgcctactggccgcagccggatggtcgcgtgcctggttttatcgacgttcccggt
catgaaaagtttctttccaacatgctggcgggcgttggtggtatcgatcacgcgctgttg
gtggtggcgtgcgatgacggcgtgatggcacagacccgtgagcatctggcgattttgcag
ctgaccggtaacccgatgctgacagtggcgctgaccaaagccgatcgcgtggacgaagcg
cgtgttgatgaggttgaacgccaggtaaaggaggttctgcgggaatacggttttgctgag
gcaaaactgtttatcaccgcagcaaccgaaggtcggggaattgatgccctgcgcgagcat
ctgcttcagttgccggaacgcgagcacgccagccaacatagtttccgcctcgcgattgac
cgcgcatttaccgtaaaaggtgccgggctggtcgtcaccggtacggcgttaagcggggaa
gtgaaggtaggcgattcactctggctgactggtgtaaataaaccgatgcgtgtacgtgcg
ctgcatgcgcaaaaccagccaacagaaaccgccaatgccgggcagcgtatcgcgcttgac
atcgcgggtgatgcggaaaaagagcagattaaccgtggcgactggctgcttgccgatgtg
ccgccagagccgttcacacgggtgattgtcgagcttcaaacccatgcaccgctgacccag
tggcagccgctgcatattcaccacgccgccagccacgtcacgggacgcgtttcactgctg
gaagataaccttgctgaactggtcttcgacaccccgttatggctggcagataacgaccgc
ctggtattgcgcgatatctctgcccgcaacacgctggccggagcgcgcgtcgtgatgctt
aacccgccgcgtcgcggtaaacgtaaaccagagtatctgcaatggctggcttccctcgcc
agggcacagaatgatagcgaagcgttagccgttcacctgcaacgcggcgcggttaatctt
cctgatttcgcctgggcgcgccagctcaacggcgaagggatgcgcgaactgctgcaacag
cctggctatattcaggctggttatagcttgttgaatgcgccggttgccgctcgctggcaa
cggaaaattctcgacacattagcgacttatcatgagcaacatcgcgatgaacctgggcct
gggcgcgaacgtctgcgacgtatggcgttgccaatggaagatgaagcgctagtactgttg
ctgattgaaaagatgcgcgaaagcggcgacatcctcagtcatcacggttggctgcatctg
ccggatcacaaagcgggcttcagcgaagagcagcaggccatctggcaaaaagcagagccg
ctgtttggtgacgagccgtggtgggtgcgtgatctggcaaaagagacgggtaccgacgag
caggcaatgcgcctgacgctacgccaggcggcgcagcaaggaataattaccgcgatcgtc
aaagatcgttattaccgtaacgatcggattgtcgaatttgccaatatgatccgcgatctc
gatcaggagtgtggttcaacctgcgcggcggatttccgcgatcgcttaggcgtaggccga
aagctggcaattcagattctggaatattttgaccgcattggctttacgcgtcgtcgtgga
aatgatcatttattgcgcgacgcattattatttccggaaaaataa
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