KEGG   Shigella flexneri 8401 (serotype 5b): SFV_4234
Entry
SFV_4234          CDS       T00377                                 
Symbol
holC
Name
(GenBank) DNA polymerase III, chi subunit
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
sfv  Shigella flexneri 8401 (serotype 5b)
Pathway
sfv03030  DNA replication
sfv03430  Mismatch repair
sfv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sfv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SFV_4234 (holC)
   03430 Mismatch repair
    SFV_4234 (holC)
   03440 Homologous recombination
    SFV_4234 (holC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sfv03032]
    SFV_4234 (holC)
   03400 DNA repair and recombination proteins [BR:sfv03400]
    SFV_4234 (holC)
Enzymes [BR:sfv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SFV_4234 (holC)
DNA replication proteins [BR:sfv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SFV_4234 (holC)
DNA repair and recombination proteins [BR:sfv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SFV_4234 (holC)
SSDB
Motif
Pfam: DNA_pol3_chi PBP1c_linker_2
Other DBs
NCBI-ProteinID: ABF06216
LinkDB
Position
4371873..4372316
AA seq 147 aa
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP
AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYE
DSLKQLARERYKAYRVAGFNLNTATWK
NT seq 444 nt   +upstreamnt  +downstreamnt
atgaaaaacgcaacgttctaccttctggacaatgacaccaccgtcgatggcttaagcgcc
gttgagcaactggtgtgtgaaattgccgcagaacgttggcgcagcggtaagcgcgtactc
atcgcctgtgaagatgaaaagcaggcttaccggctggatgaagccctgtgggcgcgtccg
gcagaaagctttgttccgcataatttagcgggagaaggaccgcgcggcggtgcgccggtg
gagatcgcctggccgcaaaaacgcagcagcagcccgcgcgatatattgattagtctgcga
acaagctttgcagattttgccaccgctttcacagaagtggtagacttcgttccttatgaa
gattctctgaaacaactggcgcgcgaacgctataaagcctaccgcgtggctggtttcaac
ctgaatacggcaacctggaaataa

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