Shigella flexneri 8401 (serotype 5b): SFV_4425
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Entry
SFV_4425 CDS
T00377
Symbol
yjjK
Name
(GenBank) putative ATP-binding component of a transport system
KO
K06020
energy-dependent translational throttle protein EttA
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfv03016
]
SFV_4425 (yjjK)
Transfer RNA biogenesis [BR:
sfv03016
]
Prokaryotic type
tRNA transport factors
tRNA export factors
SFV_4425 (yjjK)
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Ortholog
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GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_tran_Xtn
SMC_N
AAA_29
MMR_HSR1
ATP-synt_ab
AAA_23
RsgA_GTPase
AAA_22
AAA_27
Dynamin_N
NB-ARC
AAA_28
nSTAND3
HAUS4
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
ABF06394
UniProt:
Q0SX21
LinkDB
All DBs
Position
complement(4561542..4563188)
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AA seq
548 aa
AA seq
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MHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQP
DIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDKLAAEQGR
LEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEKPDMLLLD
EPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSW
LEQKDQRLAQEASQEAARRKSIEKELEWVRQGTKGRQSKGKARLARFEELNSTEYQKRNE
TNELFIPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFR
MISGQEQPDSGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKIGNTEIPSRAY
VGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENAL
LEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGADALEPKR
IKYKRIAK
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgtgtcggcaaagttgttccgccgaaacgtcatattttgaaaaacatctctctg
agtttcttccctggggcaaaaattggtgtcctgggtctgaacggcgcgggtaagtccacc
ctgctgcgcattatggcgggcattgataaagacatcgaaggtgaagcgcgtccgcagcca
gacatcaagattggttatctgccgcaggaaccgcagctgaacccggaacacaccgtgcgt
gagtccattgaagaagcggtttcagaagtggttaacgccctgaaacgcctggatgaagtg
tatgcgctgtacgccgatccggatgccgattttgacaagctggccgctgaacaaggccgt
ctggaagagatcattcaggctcacgacggtcataacctgaacgtacagctggagcgtgcg
gcggatgcgctgcgtctgccagattgggacgcgaaaatcgctaacctctccggtggtgag
cgtcgtcgcgtggcgttgtgccgcctgctgctggaaaaaccagacatgctgctgctcgac
gaaccgaccaaccacctggatgccgaatccgtggcgtggctggaacgcttcctgcacgac
ttcgaaggcaccgtggtggcgattactcacgaccgttacttcctcgataacgttgcaggc
tggatcctcgaactggaccgcggtgaaggtattccgtgggaaggtaactactcctcctgg
ctggagcagaaagatcagcgtctggcgcaggaagcttcacaagaagcggcgcgtcgtaag
tcgatcgagaaagagctggagtgggtacgtcagggaactaaaggccgccagtcgaaaggt
aaagcacgtctggcacgctttgaagagctgaacagcaccgaataccagaaacgtaacgaa
accaacgaactgtttattccacctggaccgcgtctgggcgataaagtgctggaagtcagc
aacctgcgtaaatcctacggcgatcgcctgctgattgatgacctgagcttctcgatcccg
aaaggggcgatcgtcgggatcatcggtccgaacggcgcgggtaaatcgaccctgttccgt
atgatctccggtcaggaacagccggacagcggcaccatcactttgggtgaaacggtgaaa
ctggcatcggttgatcaattccgtgactcaatggataacagcaaaaccgtttgggaagaa
gtttccggcgggctggatattatgaagatcggcaacaccgagattccaagccgcgcctac
gttggccgctttaactttaaaggggttgatcagggtaaacgtgttggcgaactttccggt
ggtgagcgcggtcgtctgcatctggcgaagctgctgcaggttggcggcaacatgctgctg
ctcgacgaaccaaccaacgacctggatatcgaaaccctgcgcgcgctggaaaacgccctg
ctggagttcccgggctgtgcgatggttatctcgcacgaccgttggttcctcgaccgtatc
gccacgcacatcctggactaccaggatgaaggtaaagttgagttcttcgaaggtaacttt
actgagtacgaagagtacaaaaaacgcacgctgggcgcagacgcgctggagccgaagcgt
atcaagtacaagcgtattgcgaagtaa
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