Shigella flexneri 8401 (serotype 5b): SFV_4426
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Entry
SFV_4426 CDS
T00377
Symbol
slt
Name
(GenBank) soluble lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sfv01011
]
SFV_4426 (slt)
Enzymes [BR:
sfv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
SFV_4426 (slt)
Peptidoglycan biosynthesis and degradation proteins [BR:
sfv01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
SFV_4426 (slt)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
TPR_6
Motif
Other DBs
NCBI-ProteinID:
ABF06395
UniProt:
Q0SX20
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All DBs
Position
4563420..4565357
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AA seq
645 aa
AA seq
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MEKAKQVTWRLLAAGVCLLTVSSVARADSLDEQRSRYAQIKQAWDNRQMDVVEQMMPGLK
DYPLYPYLEYRQITDDLMNQPAVTVTNFVRANPTLPPARTLQSRFVNELARREDWRGLLA
FSPEKPGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGKSQPNACDKLFSVWRASGKQD
PLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASAIISLANNPNTVLTFARTTGATDF
TRQMAAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAK
WRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERG
REAEAKEILHQLMQQRGFYPMVAAQRIGEEYELKIDKAPQNVDSTLTQGPEMARVRELMY
WNLDNTARSEWANLVKSKSKTEQAQLARYAFNNQWWDLSVQATIAGKLWDHLEERFPLAY
NDLFKRYTSGKEIPQSYAMAIARQESAWNPKVKSPVGASGLMQIMPGTATHTVKMFSIPG
YSSPGQLLDPETNINIGTSYLQYVYQQFGNNRIFSSAAYNAGPGRVRTWLGNSAGRIDAV
AFVESIPFSETRGYVKNVLAYDAYYRYFMGDKPTLMSATEWGRRY
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaagccaaacaagttacctggcggctgttggctgccggtgtctgtctgctgacg
gtcagcagcgtggcgcgagccgactcactggatgagcagcgtagccgttacgcgcaaatc
aagcaggcctgggataatcgacagatggatgtggtcgaacaaatgatgcctggactgaag
gattatccgctttatccctacctggaataccgccagatcaccgatgacctgatgaatcaa
ccggcggtgacggtcactaactttgttcgcgctaaccccacgcttcctcccgctcgcacg
ctgcaatctcgtttcgtcaatgaactggcgcggcgtgaagactggcgtggcttgttagcc
tttagcccggaaaagcccggaactaccgaagcgcaatgtaattactactatgcgaaatgg
aacaccgggcagagtgaagaagcctggcaaggggcgaaagagctgtggctaaccggcaag
agccagcctaacgcctgtgacaagttatttagcgtctggcgtgcgtcaggtaaacaagat
ccgctggcgtatttagagcgtatccgtctggcgatgaaagcgggtaacacaggcctggta
acagtgctggcagggcagatgcctgccgattaccagactatcgcctcggcaatcatttca
ctggcgaacaaccctaatacggtactgaccttcgcgcgtacaaccggcgcgaccgatttt
acccgtcaaatggcggcggtggcgtttgccagtgtggcgcggcaggatgccgaaaatgca
cggctgatgatcccgtcgcttgcccaggcgcagcagcttaatgaagatcagattcaggag
ctgcgcgatatcgtcgcctggcgtttgatgggcaatgatgtcaccgatgagcaggcgaaa
tggcgcgatgacgccattatgcgctcgcaatccacgtcgttgattgaacgccgtgtgcga
atggcgcttggcaccggcgatcgtcgcggcctgaatacctggctggcgcgtctgccgatg
gaagcaaaagagaaagatgaatggcgttactggcaggcggatttattgctggaacgcgga
cgtgaagctgaagcgaaagagattttgcatcaacttatgcaacagcgtggtttctacccg
atggttgcagcacaacgcatcggtgaagagtatgagctgaagattgataaagcgccgcag
aatgttgacagcaccctgactcaggggccggagatggcgcgcgtgcgcgagttgatgtac
tggaatctcgataataccgcgcgtagcgagtgggccaatctggtgaagagcaagtcaaaa
acagagcaggctcaactggctcggtatgctttcaataaccaatggtgggatcttagcgtt
caggcaacgatcgccgggaagctttgggatcatctggaagagcgattcccgctggcttac
aacgatcttttcaaacgttacaccagtgggaaagagatcccgcaaagctatgcgatggcg
attgcccgtcaggagagcgcctggaatccgaaagtgaaatcaccggtaggggccagcggc
ctgatgcagattatgcctggtacagcgacccatacggtgaagatgttctctattcctggt
tatagcagccctgggcaattgctggatccggaaacgaacatcaacattggcaccagttac
ctgcaatatgtttatcagcagtttggcaataaccgtattttctcctcagcagcttataac
gccggacctggacgggtgcgaacctggcttggcaacagcgccgggcgtatcgacgctgtg
gcatttgtcgagagtattccgttctccgagacgcgcggttatgtgaagaacgtgctggct
tatgatgcttactaccgctatttcatgggggataaaccgacgttgatgagcgccacggaa
tggggacgtcgttactga
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