Serratia fonticola DSM 4576: WN53_00420
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Entry
WN53_00420 CDS
T04030
Name
(GenBank) Ada
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sfw
Serratia fonticola DSM 4576
Pathway
sfw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WN53_00420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfw03000
]
WN53_00420
03400 DNA repair and recombination proteins [BR:
sfw03400
]
WN53_00420
Enzymes [BR:
sfw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
WN53_00420
Transcription factors [BR:
sfw03000
]
Prokaryotic type
Helix-turn-helix
AraC family
WN53_00420
DNA repair and recombination proteins [BR:
sfw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WN53_00420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_23
RecR_HhH
HHH
DUF1952
Motif
Other DBs
NCBI-ProteinID:
AKG67725
UniProt:
A0A0F7D0S1
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Position
complement(117639..119147)
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AA seq
502 aa
AA seq
DB search
MNKKLTPSDAMKNQQQALYSALSARDRKFDGRFFVGVSSTGIYCRPVCSARTPKIENCTF
YPSAAAAELAGFRPCLKCRPELAPGLALIDLGNRYAQVAVQLIEQGYLSEHSCEQLATRL
GISDRHLRRIFAEQFGASPIDYAQSHRLLQAKRLLADTDLPLSEVAFAAGFGSLRRFNEL
FKARYRLIPSVLRSTAGRSERAATSGLVFHLGYRPPYDWPRMLGFLQTRAVSGVESVVGQ
QYCRSIAVEQGGVEYCGWVSVQPEEARNRVRVEIAPSLSRVTTEVLRRIRQLFDLDAAPD
RICEALGALAADAPGLRLPGCVSSFEQATRAVLGQLVSVKMAATFAGRMAERWGTVLEQP
YGDITHVFPQAARIAQLQPEDLRPLGVQLKRAAALIEIARRVTEGRLQLDNVLDIEQGIK
ELTALPGIGSWTASYIAMRAWSWPDVFLAGDYLIKQRFPGMTPRQIERYAERWRPWRSYA
TLHLWHNDCWAPSVNTEVAAAE
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaactgactccgagcgatgccatgaagaatcaacaacaggcgctgtatagc
gcgctgagtgcgcgtgaccgtaagtttgacggacgattttttgtcggtgtctcctccacc
ggtatctattgcaggccggtatgtagcgcccgcacgccgaaaatcgaaaattgtacgttt
taccccagcgccgctgccgccgaactggccggttttcgcccctgcctgaaatgccgccct
gaattggctccagggctggcgctgatcgacctgggcaatcgctatgctcaggttgcggtt
cagctgatcgagcagggctatctttcagagcacagctgtgaacagctggctacccgcttg
gggatttccgatcgccatctgcggcgcatttttgccgagcagttcggcgcctcccccatt
gattacgcccagtcgcatcgtctgttacaggccaaacggctgctggcggataccgatttg
cccctgagcgaggtggcatttgccgccgggtttggcagcctgcggcgtttcaatgagctg
tttaaggcccgttatcgcctgatcccttcggtattgcgtagcactgctggccgtagtgag
cgtgccgccaccagcggactggtgtttcatctggggtatcggccaccttacgattggccg
cgtatgctggggttcttacagacgcgtgcggtcagcggcgtggaaagcgttgtcggtcaa
caatactgccgttcgatcgcggtggagcagggcggcgtcgaatattgcggttgggtgagc
gtccagccggaagaggcgcgaaaccgggttcgggtggaaattgccccgtcacttagccgg
gtgacgaccgaagtcctgcggcgcattcgccaactgttcgatctggatgccgcgccggac
cgcatttgcgaggcgttaggcgcgctagcggcagatgcgcccggcttacgtttgcctggc
tgcgtcagcagctttgagcaggctacgcgtgcggtattggggcagttggtcagcgtcaag
atggcggctacctttgccgggcggatggccgaacgctggggaacggtcctggagcagccg
tatggcgatatcactcatgtttttccgcaggcggcgcggatcgcccaactgcaaccggag
gatctgcgaccattgggcgtacagctgaagcgcgcggcggcgctgatagaaattgcacgc
agggtgacagaagggcgtttgcagttggataacgtgttggatatcgaacagggtatcaag
gagttaaccgcactgccggggataggcagttggaccgccagctatatcgcgatgcgggcc
tggtcatggccggacgtttttctggcaggggactatctgatcaaacagcgtttccccggc
atgacgccgcgccagattgagcgctatgccgaacgctggcggccttggaggtcctacgcc
accttgcatctgtggcataacgattgttgggcaccttcagtgaataccgaagtagccgcc
gctgagtaa
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