Serratia fonticola DSM 4576: WN53_02705
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Entry
WN53_02705 CDS
T04030
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sfw
Serratia fonticola DSM 4576
Brite
KEGG Orthology (KO) [BR:
sfw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfw03016
]
WN53_02705
Enzymes [BR:
sfw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
WN53_02705
Transfer RNA biogenesis [BR:
sfw03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
WN53_02705
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
OTOS
DUF5649
Motif
Other DBs
NCBI-ProteinID:
AKG68131
LinkDB
All DBs
Position
637780..638322
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AA seq
180 aa
AA seq
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MSSSRRLFFALSLPDALQQQVIRWRAEAFKPEDGRPVAAANLHLTLAFLGEVSAQKELAL
KTQAGRITQAGFSLNLDDLGHWPRPGVVWLGSKRPPRALLQLAELLRSQAARSGCYQSPM
PFHPHITLLRAATQPVAIPPGTPGWPFNASHFSLYQSSFEQGRTRYHELEQWPLGPQDKS
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctcgcgccgcctgttcttcgccttgtcgctacccgatgccttgcagcagcag
gtgatccgctggcgggccgaggcatttaaacccgaagatggccgcccggtggccgccgcc
aatctgcatctgacgctagcctttctcggcgaggtcagtgcacagaaagagctggcgcta
aaaacgcaggccgggcgtatcacgcaggcgggttttagcctcaatctggacgatcttggc
cactggccgcgccccggagtggtatggttgggcagcaaacgccccccacgcgcgctgtta
cagctggcggaattgctgcgttcgcaagcggcccgcagcggctgttatcaaagcccgatg
ccgtttcatccccatatcacgttattacgcgccgcgacccagccggtcgctattcctcct
ggcacgccgggttggccgttcaacgccagccatttctctctctaccaatcgtcgtttgaa
cagggccgtacccgctaccacgaattagagcagtggccactcggcccacaggataaatca
tga
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