Serratia fonticola DSM 4576: WN53_05165
Help
Entry
WN53_05165 CDS
T04030
Name
(GenBank) regulatory protein CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
sfw
Serratia fonticola DSM 4576
Brite
KEGG Orthology (KO) [BR:
sfw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfw03019
]
WN53_05165
Messenger RNA biogenesis [BR:
sfw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
WN53_05165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
Hrs_helical
RH1
Motif
Other DBs
NCBI-ProteinID:
AKG68561
UniProt:
A0A0F7H8Y4
LinkDB
All DBs
Position
complement(1177701..1179632)
Genome browser
AA seq
643 aa
AA seq
DB search
MRFTTKLSALITLLVALAMFLMLMGCSYSFFYVTQERLERRFEALATSIDQAMLLQPLQA
QDNWLPLVMRPLGIVAIHVDTETSNLFSYSLPTIKAPWASLAGYRQTSLTMMHHPGTRVN
VTYLDPFASDVRSLQSTAAVTLSIVIMVVILLFSLRWLREQAVGEDRLERRARRILNGER
EQVLKGDVREWPASVSGALDRLLADLAEAREERSRVDTLIRAFAAQDAKTGLNNRLFFDN
QLTTQLEDVGSHGIVMMVRLPDFDTLREIHGNAAVQELMYSLVNLLSTFVMRYPAALLAR
YFHSDFTVLLPHRTLKEADGIAAQLVNAIDSLPSTALIDREAFLHIGIVAYRSGQTTEEI
IDYAEQATRHAVLQGENGWYVYDSDVPEKGRGSVKWRTLLEQVLARGGPRLYQKPAVTVE
GDVHHREIMSRIYDGAQELLPAEYMPLVNQLGLAESYDRQQMNRIIPLLALWPEETLAFP
LCVDSLLQRSFQRWLRDTLLQCEKSHRRRILIELAEADVCQHIDRLRPVLRLLTGLGCRL
AVSQAGLTVVSTSYIKSLPVEIVKLHPGLVRSIDRRDENQLFVQSLTGACEGTQAKVFAA
SVRTRNEWQTLKDRGILGGQGDFFASPEPIDIARKKYSRRYRV
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgagatttacaaccaaactctctgctctaatcaccctgctcgtcgcattggctatgttc
ttgatgctgatggggtgttcatacagtttcttttacgtgacccaggagcgcctagagcgc
cgttttgaagccctggccacttccatcgatcaggcaatgctgcttcaacctctgcaggct
caggataactggctgcccttggtgatgcggccgctaggcatcgttgcgattcatgtcgat
accgaaaccagcaaccttttctcctacagcctgccgaccatcaaagccccttgggcatcg
ctggctggctaccgccaaacctcgttaaccatgatgcatcaccccggcacccgggtaaat
gtcacctacctcgatccgttcgccagcgacgtgcgttccttgcagtccacagcggcggtc
acgctgtcaatcgtcatcatggtggtgatcctgctgttcagcttacgctggctgcgtgaa
caggcggtaggtgaagatcgcctggagcgccgagcgcggcgcattctcaacggcgagcgt
gaacaggtgctgaagggagacgttcgcgaatggcccgccagcgtcagcggtgcgttggat
cgcctgctggccgatttggccgaagcacgtgaggagcgtagccgggtagataccctgatc
cgtgcttttgccgctcaggatgccaaaaccggcctcaataaccggctgttctttgataat
cagctcactactcagctggaagatgtcgggtcacacggcatcgtcatgatggtgcgcctg
ccagatttcgataccctgcgtgaaattcacggcaatgcagcggtgcaggagctgatgtat
tcgttggtcaacctgctgtccacttttgtcatgcgctatcctgccgccttactggcccgt
tacttccacagtgattttaccgttctgctgccacaccgcacgctgaaagaagcggacggc
atcgcggcgcagctggtcaacgcgatcgactccttgccctcaacggcgctgattgaccgt
gaggcgttcttgcatattggtattgtggcctaccgcagcgggcagaccacggaagaaatc
atcgattacgccgaacaggcgacccgccacgccgtactgcaaggcgaaaacggctggtac
gtctatgatagcgatgtgccagagaaagggcgcggcagcgttaaatggcgcacgctgctt
gaacaggtgctggcccgcggcggccctcgcttatatcaaaaaccggcggtgacggtggaa
ggtgatgtgcatcaccgcgaaatcatgagccggatttatgatggcgcacaggaactgttg
cctgccgagtatatgccgctggtcaatcagcttggcttggcggaaagctatgaccgccag
cagatgaatcggattattcctttattggcactgtggccggaagagacgctggcgtttcca
ctatgcgttgattcattattgcagcgcagttttcaacgttggctgcgcgataccctgtta
cagtgtgaaaaaagtcaccgcaggcgaattctgattgaacttgcagaggcagatgtgtgt
caacatatcgaccgtttgcgtccggtgctgcgattgctgaccggattgggctgtcgtctg
gcggtttctcaggccgggttgacggtggtgagtacctcttatatcaagtcgttaccggtg
gagatcgtcaagcttcaccctgggttggtacggagtattgaccggcgggatgagaatcag
ctgttcgttcagagcctcaccggtgcctgcgaaggcactcaagcgaaggtttttgccgcc
agcgtgcgtacgcgcaacgaatggcagacgctgaaagaccgcgggatcctaggtgggcag
ggggactttttcgcttctccagagccgatcgatatagctcgcaaaaaatattcgcgtcga
tatcgtgtttaa
DBGET
integrated database retrieval system