Serratia fonticola DSM 4576: WN53_06780
Help
Entry
WN53_06780 CDS
T04030
Name
(GenBank) threonine dehydratase
KO
K01754
threonine dehydratase [EC:
4.3.1.19
]
Organism
sfw
Serratia fonticola DSM 4576
Pathway
sfw00260
Glycine, serine and threonine metabolism
sfw00290
Valine, leucine and isoleucine biosynthesis
sfw01100
Metabolic pathways
sfw01110
Biosynthesis of secondary metabolites
sfw01200
Carbon metabolism
sfw01230
Biosynthesis of amino acids
Module
sfw_M00570
Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Brite
KEGG Orthology (KO) [BR:
sfw00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
WN53_06780
00290 Valine, leucine and isoleucine biosynthesis
WN53_06780
Enzymes [BR:
sfw01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.19 threonine ammonia-lyase
WN53_06780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Thr_dehydrat_C
YjhX_toxin
Motif
Other DBs
NCBI-ProteinID:
AKG68860
LinkDB
All DBs
Position
complement(1536036..1537580)
Genome browser
AA seq
514 aa
AA seq
DB search
MAVSQPLPDAPCGAEYLRAVLRSPVYEVAQVTPLQTMGKISARLGNTILVKREDRQPVHS
FKLRGAYAMIASLDEEQRVRGVVTASAGNHAQGVAFSGNRLGIKTLIVMPVSTADIKVDA
VRGFGGEVLLHGANFDEAKVKAIELSQQQGMTFVPPFDHPAVIAGQGTLAMELLQQDAHL
DRVFVPVGGGGLAAGVAVLIKQLMPQIKVIGVEAQDSACLRAALDAGQPVDLARVGLFAE
GVAVKRIGDETFRLCREYLDDVITVDSDAICAAVKDLFEDVRAIAEPSGALALAGLKKYV
QQHNIQGERLAHVLSGANVNFHGLRYVSERCELGEQREALLAVTIPEQKGSFLKFCQLLG
GRAVTEFNYRYADADNACIFVGVRLTRGHTERLEIIDELNRDGYQVVDLSDDEMAKLHVR
YMVGGRPSKPLRERLYSFEFPESPGALLKFLQTLGTHWNISLFHYRSHGTDFGRVLAGFE
LSQTEPEFEQHLQALGYDCHDETDNPAFRFFLQG
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggtatcacaacccctacccgacgccccctgcggcgcggaatatttgcgagcggtg
ctccgctcgccggtttacgaggtggctcaggtcaccccgttacagaccatgggcaagatc
tctgcgcgcctaggcaataccattctggtgaagcgcgaagatcgccagccggtgcacagc
tttaagctgcgcggggcttacgcgatgattgccagcctggatgaagagcagagggtgcgt
ggcgtggtcacggcctctgcgggcaaccatgcacagggcgtcgccttttccggcaaccgt
ttggggatcaaaaccctgatcgtgatgccggtgtcgacggcggatatcaaggttgatgcg
gtgcgcggttttggcggcgaagtgttactgcacggtgccaacttcgacgaagccaaggtc
aaggcgattgagctctcgcagcagcagggcatgactttcgtgcccccgttcgatcacccg
gcagtcattgccgggcagggcactttggcgatggagctgttgcagcaggacgcgcatctg
gaccgggtgtttgtcccggttggcggtggcggcctggcggccggtgtggcggtgctgatc
aagcaactgatgccgcaaatcaaagtgattggcgtggaagcccaggattcggcctgtcta
cgtgcagcgctggatgccgggcagccggtcgatctggcgcgcgttgggctgtttgccgaa
ggcgtggcggtaaagcgcatcggtgatgaaaccttccgtctgtgccgtgaataccttgat
gatgtgatcaccgtagacagcgatgcgatctgcgcagcggtgaaagatctgtttgaagac
gtgcgggccatcgccgaaccttctggcgcactggcgttggcggggctgaaaaaatacgtg
cagcagcacaatattcagggtgagcggctggcccacgtgctttccggtgccaacgtgaat
tttcacggcctgcgctacgtttccgaacgctgcgagctgggcgaacaacgcgaagcgcta
ttggcagtaaccattccagagcagaagggcagcttcctgaagttctgccaactgttgggc
ggccgtgcggtcaccgagtttaactaccgctatgccgatgctgacaatgcctgcatcttc
gtcggtgtccgcctgaccagaggccataccgagcggctggaaatcatcgatgagctgaac
cgtgatggctatcaggtggtagatctgtccgacgatgagatggcaaaactgcacgtgcgt
tacatggttggcgggcggccttcgaagccgctgcgtgagcgtctgtacagctttgagttc
ccagagtcaccgggcgctctgctcaagttcctgcaaacgttgggcacgcattggaatatt
tcgctgttccactaccgcagccacggcaccgattttggtcgcgtgctggcagggtttgag
ctttctcagactgagccagagtttgagcaacacctgcaggcgttaggttacgactgccat
gatgaaaccgacaacccggccttccggttcttcctgcagggctaa
Serratia fonticola DSM 4576: WN53_17435
Help
Entry
WN53_17435 CDS
T04030
Name
(GenBank) serine dehydratase
KO
K01752
L-serine dehydratase [EC:
4.3.1.17
]
Organism
sfw
Serratia fonticola DSM 4576
Pathway
sfw00260
Glycine, serine and threonine metabolism
sfw00270
Cysteine and methionine metabolism
sfw01100
Metabolic pathways
sfw01110
Biosynthesis of secondary metabolites
sfw01200
Carbon metabolism
sfw01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
sfw00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
WN53_17435
00270 Cysteine and methionine metabolism
WN53_17435
Enzymes [BR:
sfw01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.17 L-serine ammonia-lyase
WN53_17435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDH_alpha
SDH_beta
MmgE_PrpD_N
Motif
Other DBs
NCBI-ProteinID:
AKG70759
LinkDB
All DBs
Position
complement(3910906..3912273)
Genome browser
AA seq
455 aa
AA seq
DB search
MVSVFDIFKIGIGPSSSHTVGPMKAGKQFVDDLQAAGQLHDTTRVAVDVYGSLSLTGKGH
HTDIAIIMGLAGNLPHDVDIDSIAGFIRDVEQRGRLLLAKGEHEVDFPQIGGMNFHSTNL
PLHENGMSISAYAGDRLLHSKTYYSIGGGFIVDEENFGQSANNSVAVPYPYRSALDLQQH
CKDTGLSLSGLVMQNELALRSKAEIEAHFADVWQVMRAGIERGMNTEGLLPGPMKVQRRA
AALRRILVTGDKNNIDPMNVVDWINMFAFAVNEENAAGGRVVTAPTNGACGIIPAVLAYY
DQFIRPVNTNSYSRYFLTAGVIGTLYKMNASISGAEVGCQGEVGVACSMAAAGLAELMGG
SPAQVCIAAEIAMEHHLGLTCDPLAGQVQVPCIERNAISAVKAVNAARMALRRTSEPRVC
LDKVIETMYETGKDMNSKYRETSQGGLAIKVVACN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggtcagcgttttcgatattttcaaaattggcatcggcccttccagttcccacaccgtc
ggcccgatgaaagccggtaaacagtttgtcgatgatttgcaggctgccgggcaactccac
gatacaacacgggtggcggttgacgtctacggctcactgtcactgacgggtaaagggcac
cataccgacatcgcgattattatgggcctggcgggcaatctgccccatgacgtggacatc
gacagcatcgccggctttattcgtgatgtggaacagcgtggccgcctattgttggcaaag
ggtgagcacgaggttgattttccacagattggtggcatgaacttccacagcactaacctg
ccgctgcacgaaaacggcatgtcgatcagcgcctatgctggcgatcggttgctgcacagc
aaaacctattactccatcggcggcggatttatcgttgatgaagaaaacttcggccaatcg
gccaacaatagcgtcgcggtcccctacccttatcgttccgcgctggatttgcagcagcac
tgcaaagataccgggctgtcactttccgggttggtgatgcagaacgaactggcattgcgc
agcaaagcagagatcgaagcgcactttgccgacgtctggcaggtgatgcgtgccggtatc
gaacgcggtatgaataccgaagggttgctccccggcccgatgaaagtacagcgccgtgcc
gccgccctgcgccgcattctggtaaccggtgacaagaacaatatcgacccgatgaacgta
gtggattggatcaatatgttcgcgtttgcggtcaacgaagagaacgctgcgggtggccga
gttgtcacggcacccaccaacggagcctgcggtatcattccagcggtgctggcgtattac
gaccagtttatccgcccggtgaacaccaactcctacagccgttacttcctgactgccggt
gtgataggcacgctgtacaagatgaatgcttccatctccggcgccgaagtgggctgccaa
ggggaagtcggcgtggcctgctcgatggcggcagctggtctggcggagttgatgggcggt
agcccggcacaggtttgtatcgccgcagagattgccatggagcaccatctggggctgacc
tgtgatcccctggccggacaggttcaggtgccttgtatcgaacgtaacgcgatttctgcc
gtgaaggcagtcaacgccgcacgtatggcactgcgtcgcaccagcgagccacgcgtttgc
ctggataaggtgatcgaaaccatgtacgaaaccggcaaggacatgaactccaaataccgc
gagacatcacagggcggattggccatcaaggttgtggcgtgtaattga
Serratia fonticola DSM 4576: WN53_23395
Help
Entry
WN53_23395 CDS
T04030
Name
(GenBank) serine dehydratase
KO
K01752
L-serine dehydratase [EC:
4.3.1.17
]
Organism
sfw
Serratia fonticola DSM 4576
Pathway
sfw00260
Glycine, serine and threonine metabolism
sfw00270
Cysteine and methionine metabolism
sfw01100
Metabolic pathways
sfw01110
Biosynthesis of secondary metabolites
sfw01200
Carbon metabolism
sfw01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
sfw00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
WN53_23395
00270 Cysteine and methionine metabolism
WN53_23395
Enzymes [BR:
sfw01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.17 L-serine ammonia-lyase
WN53_23395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDH_alpha
SDH_beta
DUF2790
Motif
Other DBs
NCBI-ProteinID:
AKG71828
UniProt:
A0A0F7HFB9
LinkDB
All DBs
Position
5271738..5273102
Genome browser
AA seq
454 aa
AA seq
DB search
MISVFDMFKIGIGPSSSHTVGPMKAGKQFVDDLVNEGLMPSVTRVAVDVYGSLSLTGKGH
HTDIAIILGLAGNMPDTVDIDGIPGFIRDVEQRQRLMLASGLHEVDFPRDGGMVFRSDNM
PLHENAMQIHAFAGDKQIYSKTYYSIGGGFIVDEEHFGKAESNEISVPYPFHSASEMLAH
CHATGLSLSGMVMQNELALHSKQEIEAYFGNVWQTMRACIDRGLNTEGVLPGPLRVPRRA
SALRRLLVSSDKLSSDPMNVIDWVNMFALAVNEENAAGGRVVTAPTNGACGIVPAVLAYY
DHFIESVSPETYVRYFMASGAIGTLYKMNASISGAEVGCQGEVGVACSMAAAGLAELLGG
SPEQVCIAAEIGMEHNLGLTCDPVAGQVQVPCIERNAIASVKAINSARMALRRTSEPRVS
LDKVIETMYETGKDMNAKYRETSRGGLAIKVQCD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgattagcgttttcgacatgtttaagatcggcatcggcccgtccagctctcatacggtt
ggaccgatgaaagccggcaaacagtttgtcgacgatctggtaaacgaaggcttgatgcct
tccgtcacgcgtgttgccgtcgatgtttacggctcactctcattgaccggtaaaggtcac
cataccgatatcgccatcattctcggcctggcgggcaatatgcctgataccgtcgatatc
gatggcatcccgggctttattcgcgatgttgagcaacgtcaacgcctgatgctggccagc
ggcctgcacgaagtcgatttcccccgcgatggcggcatggtcttccgtagcgacaatatg
ccgctgcacgaaaacgccatgcagatccatgccttcgcaggcgacaagcagatttacagc
aaaacctattactccatcggtggcgggtttatcgttgacgaagaacatttcggcaaagcc
gaaagtaacgaaatctcggttccctatccgttccactcggcaagcgaaatgttggcccac
tgccacgctaccggtctgtccctctccgggatggtcatgcaaaacgaactggcactgcat
agcaagcaggagatcgaagcctatttcggcaacgtttggcaaaccatgcgcgcctgtatc
gatcgcggtctgaacaccgaaggcgtactgcctggcccgctgcgggttccacgccgcgcc
tccgccctgcgccgcttgctggtttcctcagacaaactgtccagcgacccaatgaacgtg
atcgactgggtcaacatgtttgcgctggcggtaaacgaagagaacgccgccggtggccgc
gtggtgaccgccccaaccaacggagcctgcgggatcgtccctgcggtgctggcttactac
gatcatttcatcgagtccgtcagcccggaaacctatgtccgctactttatggcgtcgggc
gcgattggcactctgtataaaatgaacgcctcgatttccggtgccgaagtgggctgccag
ggcgaagtgggtgtggcctgttcgatggccgctgcgggcctggccgagttgcttggcggc
agccctgagcaggtttgcatcgccgccgaaatcggcatggagcataacctgggcttgacc
tgcgatcccgttgccggccaggtacaggtcccttgcatcgagcgcaacgccattgcctcg
gtgaaagcgatcaactcggcgcgtatggcattgcgccgcaccagcgagccgcgtgtgtcg
ctggataaggtgatcgaaaccatgtacgaaaccggtaaagacatgaacgccaagtatcgt
gagacctcccgtggcggtctggcgatcaaggttcagtgtgactga
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integrated database retrieval system