Serratia fonticola DSM 4576: WN53_07015
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Entry
WN53_07015 CDS
T04030
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sfw
Serratia fonticola DSM 4576
Pathway
sfw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WN53_07015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfw03400
]
WN53_07015
Enzymes [BR:
sfw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WN53_07015
DNA repair and recombination proteins [BR:
sfw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WN53_07015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA-like_WH
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_22
AAA_19
TrwB_AAD_bind
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AKG68900
LinkDB
All DBs
Position
1590529..1592724
Genome browser
AA seq
731 aa
AA seq
DB search
MPVVHVALPVPLARTFDYLLPAGLQPVIGARVSVPWGKQRAIGIITGSSESSELPLERLK
PIDSLLDNDSLFTTSLWRILLWASEYYHYPIGEVLFHALPILLRQGKPAEVAPLWQWFAT
EQGRATPPESLKRAPKQQQALAALLQRPVYRHQVSELELTESALQALRTKGLIDLRSQTV
ATQDWRPGFAVLGERLRLNTEQATAVGAIRSEDDQFAAWLLAGVTGSGKTEVYLSVLENI
LAKGKQALVLVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLAVWLRARSGEAAIVI
GTRSALFTPFSRLGVIIIDEEHDSSYKQQEGWRYHARDLAVFRAHAENIPLVMGSATPAL
ETLHNVQLGKYRQLKLTQRAGNAKPANQHLIDLKGLPLKVGLSQPLLKSMQHHLKNGNQV
ILFLNRRGYAPALLCHECGWIAECQRCDHYYTFHQHQRQLRCHHCDSQRPVPHQCPQCGT
TNLVSVGVGTEQLENELAPLFPETAITRIDRDTTSRKGSLEQHLADIHRGGPRILIGTQM
LAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVLLQTHHP
EHPLLQILLQQGYDAFAKQTLAERNSVFLPPYTSHIIVRSEDHDNQQAPLFLQQLRNLLE
ASPLKDDSLWVMGPVPALQPKRGGRFRWQLLLQHPSRKLLQHLIKSTLPLIGTLPQARKV
KWTLDVDPIDS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttgtacacgttgctctaccggttccccttgcccgcaccttcgattatctgctg
cccgcaggcctgcagccggtcatcggcgcgcgcgtcagtgtgccttggggaaagcaacgg
gcgataggcatcatcaccggcagcagcgagagcagtgaactgccgctggaaaggctcaag
cccatcgatagcctgctggataacgactcgctattcaccaccagcctgtggcgcatcctg
ctgtgggccagcgaatactaccattacccgatcggtgaagtgttgttccatgcgctgccc
attctattgcgtcagggtaagcccgcagaggtcgccccgctgtggcaatggtttgctacc
gaacaggggcgcgcaaccccgccggaaagcctgaagcgtgcgccaaagcagcaacaggca
ctggcggcgctgctacaacgcccggtgtatcgccatcaggtgagcgaactggaactgacg
gaaagcgcgctccaggcgctgcgtacaaaaggcttgatcgacctgcgttcgcaaacggta
gcaacgcaggattggcggccgggctttgccgtactcggtgaacggctgcggctcaatacc
gaacaggccaccgccgtgggcgcgatccgcagtgaagacgaccagtttgccgcctggctg
ctggccggggtcaccggatccggcaaaaccgaggtttacctcagcgtactggaaaatatt
ctggcgaaaggtaagcaggcgctggtgttggtgccggagatcggcctgaccccgcagacc
atcgctcgctttcgcgaacgcttcaacgcaccggtagaagtcctgcactccggcctgaac
gacagcgaacggctggccgtttggctgcgcgcgcgcagcggtgaagccgccattgtgatc
ggcacccgttcggcgttgttcacccccttctcgcgccttggggtgatcatcatcgacgaa
gaacacgacagctcctataaacagcaggaaggctggcgctatcacgctcgcgatctggcg
gtgttccgcgctcacgccgaaaacatcccgctggtaatgggctcggcgacgccagcgctg
gaaacgctgcacaacgtgcagttaggcaaataccgtcagctcaaactgacccagcgggca
ggcaacgccaaaccggccaaccaacatctgatcgatttgaaaggcctgccgctgaaggtc
gggctctctcagcctctgctgaaaagcatgcagcaccacctcaagaacggcaatcaggtg
atcctgttccttaaccgccgaggctatgcacccgcgctactgtgccatgagtgtggctgg
atcgccgaatgccagcgctgcgaccattactacacgttccaccagcatcaacgccagctg
cgctgccaccactgcgacagccagcgcccggtgccacatcagtgcccgcagtgcggtacc
accaacctggtttccgtcggcgtcggtaccgaacagttggaaaatgaactggctcccctg
ttcccggaaaccgccattacccgtatcgatcgcgataccaccagccgcaaggggtcactg
gaacagcatctggccgatattcaccgtggcggcccacgtatcctgatcggcacgcaaatg
ctggccaaaggccaccacttcccggatgtcaccctggtggcattgctcgacgtggacggc
gcgctattctccgccgatttccgttctgccgagcgttttgcccagctctatactcaggtt
tcaggccgtgctggcagggcaggtaaacagggcgaagtgctgctgcaaactcatcacccg
gaacatccgttactgcaaatcctgctgcaacagggctacgacgcctttgccaagcaaacc
ctggccgagcgtaacagcgtcttcctgccgccctacaccagccacatcatcgtgcgttcg
gaagatcacgataaccagcaggcaccgctgttcttacagcagctacgcaatctgttggaa
gccagcccgctgaaggatgattcgctgtgggtaatgggcccagttcccgccctgcaaccc
aaacgtgggggtcgcttccgctggcaactcttgttgcaacacccgtccagaaaactgtta
cagcacctgataaaaagcacgttgccattgattggcaccctgcctcaggcgcgtaaagtt
aaatggacgttagacgttgatcccattgatagttga
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