Serratia fonticola DSM 4576: WN53_09200
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Entry
WN53_09200 CDS
T04030
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sfw
Serratia fonticola DSM 4576
Pathway
sfw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WN53_09200 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfw03021
]
WN53_09200 (rho)
03019 Messenger RNA biogenesis [BR:
sfw03019
]
WN53_09200 (rho)
Transcription machinery [BR:
sfw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
WN53_09200 (rho)
Messenger RNA biogenesis [BR:
sfw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
WN53_09200 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
OB_RNB
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AKG69272
UniProt:
A0A0F7H9F1
LinkDB
All DBs
Position
2081978..2083237
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AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARLRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSGDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLAAPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLARKIAEKRVFPAIDY
NRSGTRKEELLTTSEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgattactctcggcgaaaat
atggggctggaaaacctggcccgcctgcgcaaacaggacattatcttctctatactcaag
caacatgcgaaaagcggagaagatatcttcggtgatggcgtgctggagatattgcaggat
ggatttggtttcctccgttccggagacagttcctacctcgcaggccccgacgatatctac
gtttctcccagccaaatccgccgcttcaacctccgcacaggtgacaccatttccggtaag
attcgtccgccaaaagaaggcgagcgctattttgccctgttgaaagttaacgaagtcaac
tacgacaaaccggaaaacgcccgtaacaagatcctgttcgaaaacctgacgccgctgcac
gccaactcacgtttgcgtatggagcgcggcaacggctctaccgaagatctgacggctcgc
gtactggatctggcagcgccaatcggtcgtggccagcgtggcctgattgtggcaccgccg
aaagccggtaaaaccatgctgctgcaaaacattgcgcagagcatcgcatacaaccatcca
gactgcgtgctgatggtgttgctgatcgacgaacgtccggaagaagtgaccgagatgcaa
cgtctggtaaaaggcgaagtgatcgcctctacctttgacgaacccgcatcccgccacgta
caggttgccgaaatggtgatcgagaaggccaagcgcctggtcgaacacaaaaaagacgtg
atcatcctgctggactccatcacccgtctggcgcgtgcctacaacaccgtagtacctgcc
tcaggcaaagtgctgaccggtggtgtggatgccaacgccctgcatcgtccgaagcgtttc
ttcggtgcggctcgtaacgttgaggaaggcggcagcctgaccatcatcgctaccgcactg
gtcgataccggttcgaagatggacgaagtgatctacgaagagtttaaaggtacgggtaac
atggaactgcatctggcgcgtaaaatcgccgagaagcgcgtgttcccagctatcgattac
aaccgttccggtacgcgtaaagaagagttgctcaccacctctgaagaactgcagaagatg
tggatcctgcgcaagatcattcacccaatgggcgagatcgacgcgatggagttcctcatt
aacaagttggcgatgaccaaaaccaacgatgaattcttcgacatgatgaaacgctcataa
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