Serratia fonticola DSM 4576: WN53_09350
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Entry
WN53_09350 CDS
T04030
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sfw
Serratia fonticola DSM 4576
Pathway
sfw03420
Nucleotide excision repair
sfw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WN53_09350 (uvrD)
03430 Mismatch repair
WN53_09350 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfw03400
]
WN53_09350 (uvrD)
Enzymes [BR:
sfw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WN53_09350 (uvrD)
DNA repair and recombination proteins [BR:
sfw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WN53_09350 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
WN53_09350 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
Viral_helicase1
AAA_22
DUF4391
Motif
Other DBs
NCBI-ProteinID:
AKG69296
LinkDB
All DBs
Position
2111104..2113266
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AA seq
720 aa
AA seq
DB search
MDVSDLLDSMNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLAVENCSPYSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRIVRALNIDEKQWPPRQAMWYINGKKDDGLRPQHIESYGNPVEATWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNRIQYAWIHMLAGGK
ANVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETVRLEQNYRSTSTILKAANTLIANN
DGRMGKNLWTEGAEGEPISIYCAFNELDEARFVVNRIKAWQDNGGALNDCAILYRSNAQS
RVLEEALLQTAMPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQAARDRQLTLWQATRALLQDKVLAGRAASSLQRFLELVDSLAHETAEMPLHVQ
TDRVIRDSGLFIMYEQEKGEKGQARIENLEELVTATRQYSYQDEDQDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFRQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGLTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEIPEDCVEEVRLRASVSRSVSHRRMG
TPISESDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQIAFQGEGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttccgacctgctcgacagcatgaatgataaacaacgtgaagccgtggctgcg
ccacgcagcaacctgttggtgctggccggtgcaggcagcggcaagacccgggtgctggtg
catcgcattgcctggctactggcggtagagaactgctcgccgtactccatcatggcggtg
actttcaccaacaaggcggcggcagagatgcgccaccgtatcgaacacctgattggcacc
agccagggcggtatgtggatcggcaccttccacggcttggcgcaccgcctgctgcgcgct
catcatatggacgccaacctgccgcaggacttccagatcctggatagtgaagatcaactg
cgcctgctgaaacgcatcgtgcgggcgctgaacattgacgagaagcaatggccgccgcgc
caggcgatgtggtacatcaacggcaagaaagatgatggcctacgcccgcagcatatcgaa
agctatggcaacccggtggaagccacctggctgcggatctatcaggcttatcaggaggct
tgcgatcgtgcagggctggtcgattttgccgaattgctgttgcgcgcccatgagctgtgg
ctgaacaagccgcatatcctcaatcattatcgtgagcgcttcaccaatatcctggtggac
gaattccaggacaccaaccgcatccagtacgcctggatccacatgctggccgggggcaag
gccaacgtgatgatcgtgggggatgatgaccagtcgatctacggctggcgtggtgcgcag
gtggaaaacatccagcgtttcctgaaggatttccccggtgcagaaacggtgcgtctggag
cagaactatcgctcgaccagcaccatcctgaaggccgccaacaccctgatcgccaataac
gacgggcgcatgggcaaaaacctgtggaccgaaggggccgaaggcgagccgatctcgatt
tactgtgcgttcaacgagctggatgaagcccgctttgtggttaaccgcatcaaggcctgg
caggacaacggcggcgcgctgaacgactgcgccatcctgtatcgcagcaacgcccaatcg
cgcgtgctggaagaggccttgttgcaaactgccatgccataccgcatttacggcggcatg
cgcttcttcgaacgccaggagatcaaggatgctctggcctatctgcgactgatcgccaac
cgtaacgatgatgcggcctttgagcgtgtcgtgaataccccaacgcgcggcattggcgat
cgcaccctcgacgtagtgcgccaggcggcacgagaccgtcaactgacgctgtggcaggct
acccgtgcgctgctgcaagataaggtgctggcgggccgtgcagcgtcctccctgcagcgt
tttctggagctggtggactcactggcccacgaaaccgccgaaatgccgttgcatgtgcaa
accgaccgggtgatccgcgattccgggctgtttatcatgtatgagcaggaaaagggcgag
aagggccaggcgcgtatcgaaaaccttgaggaactggtcacggccacgcgccaatacagc
taccaggatgaagatcaggatctgatgccgttgcaggccttcctgtcccatgccgcgttg
gaagcgggggaagggcaggcagatgcctatcaggacgcggtgcagctgatgaccctgcac
tcggccaaagggttggagttccgccaggtgtttatcgtcggtatggaagagggtatgttc
ccaagccagatgtcgctggacgaaggtggccgcctggaagaggagcgccgtctggcctat
gttggcctgacccgtgcaatgcaaaaattgacgctgacctatgcggaaacccgccgcctg
tatggcaaagaggtgtatcaccggccatcacgctttatcggtgagatcccggaagactgt
gtggaagaggtgcgcctgcgggccagcgtctcccgctcggtaagccaccgccggatgggg
acgccgatcagtgaaagcgacactggttacaagcttgggcagcgcgtgcgccatgccaag
tttggcgagggcaccatcgtcaacctggaaggcagtggggagcacagccggttgcagatc
gcgtttcagggtgaaggtatcaagtggctggtagcagcctacgccaagctggaaacggta
taa
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