Serratia fonticola DSM 4576: WN53_10635
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Entry
WN53_10635 CDS
T04030
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sfw
Serratia fonticola DSM 4576
Pathway
sfw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WN53_10635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfw03019
]
WN53_10635
03009 Ribosome biogenesis [BR:
sfw03009
]
WN53_10635
Enzymes [BR:
sfw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
WN53_10635
Messenger RNA biogenesis [BR:
sfw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WN53_10635
Ribosome biogenesis [BR:
sfw03009
]
Prokaryotic type
rRNA helicases
WN53_10635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
Cas3-like_C_2
UTP25_NTPase-like
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKG69524
UniProt:
A0A0F7HAW1
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All DBs
Position
2388313..2390271
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AA seq
652 aa
AA seq
DB search
MTTELETSFADLGLSAPIIAALTDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA
FSLPLLHNLDAALKAPQILVLAPTRELAVQVAEAMTDFSKHMHGVNVVALYGGQRYDVQL
RALRQGPQIVVGTPGRLLDHLKRGTLNLSGLKGLVLDEADEMLRMGFIEDVETIMAEIPA
EHQTALFSATMPEAIRRITRRFMKDPQEVRIQSSITTRPDISQSYWTVQGMRKNEALVRF
LEAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKSGRLDIL
IATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRN
IERTMKLTIPEVELPNADLLGERRLAKFAAKVQQQLESSDLDMYRALLAKLQPGEDLDME
TLAAALLKMAQGERPLILPPDPVFKPRQRREFNDRDDRGGERSNDRRRDARPDSRDGGAE
RPRRERRDVGEMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELP
KGMPGEILNHFTRTRILNKPMNMQLLGDAQPHERRERPAGGNGGERRGGARPFNGERREG
APAPRRSFGERREGGNAAGGERRGGNFNRDKPAPRRDDAAAPAAPRRRFGDA
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgactactgagcttgaaacctcttttgctgacctggggctgtctgctccgatcattgct
gccctgaccgatctgggctacgaaaaaccatcaccgatccaggctgagtgtattcctcac
ctgttgaacggtcgcgacgtgctgggcatggcgcagaccggtagtggtaaaactgcggcg
ttctcgctgcccctgctgcacaacctcgatgcagccctgaaagcaccacaaatcctggta
ctggctccaacccgcgaactggcggttcaggttgctgaagccatgaccgatttctccaag
cacatgcatggcgttaacgtggtggccctgtacggtggccaacgttatgacgtgcagctg
cgcgctctgcgtcagggcccgcaaatcgtagtagggaccccgggccgtctgctggaccac
ctgaaacgtggcaccctgaacctgtctggcctgaaaggcctggttctggacgaagccgac
gaaatgctgcgcatgggctttatcgaagacgtagaaaccatcatggcggagatcccggct
gaacatcagaccgcgctgttctctgcgaccatgccggaagcgatccgtcgtattacccgt
cgcttcatgaaagatccacaggaagtgcgcattcagtccagcatcaccactcgcccggac
attagccagagctactggaccgtgcagggcatgcgtaaaaacgaagcgctggtgcgtttc
ctggaagctgaagattttgatgcggcgatcatcttcgtacgtaccaaaaatgcgaccctg
gaagtggccgaagcgctggagcgcagcggttacaacagcgccgcactgaacggtgatatg
aaccaggcgctgcgtgagcaaaccctggaacgtctgaaaagtggccgtctggatattctg
atcgccaccgacgttgccgctcgtggtctggacgttgagcgtatcagcctggtagtaaac
tatgacatccctatggattcagagtcttacgttcaccgtatcggccgtaccggtcgtgct
ggtcgtgctggccgcgcgctgctgttcgtagaaaaccgcgaacgccgcctgctgcgcaac
atcgaacgcaccatgaagctgaccatccctgaagttgagctgccaaacgcagatctgctg
ggtgagcgccgcttggccaagtttgccgctaaagttcagcagcagctggaaagcagcgat
ctggatatgtaccgtgcgctgctggctaagctgcagccgggtgaagatctggatatggaa
acgctggccgctgcactgctgaagatggcgcagggcgaacgtcctctgatcctgccacca
gatccagtgttcaaaccgcgtcaacgtcgtgagttcaacgaccgtgatgatcgcggtggc
gagcgtagcaacgaccgtcgtcgtgatgcacgtccagacagccgtgatggcggcgctgag
cgtccacgtcgcgaacgtcgtgacgttggtgaaatgcagctgtaccgcattgaagttggc
cgtgatgacggcgtggaagttcgtcatatcgttggcgcgatcgctaacgaaggtgacatc
agcagccgttacatcggtaacatcaagctgtttgcttcccactccaccatcgagctgcca
aaaggcatgccgggcgagatcctgaatcactttactcgcactcgcattctgaacaagccg
atgaacatgcaattgctgggcgatgcgcagccgcatgaacgtcgtgagcgtcctgccggt
ggtaacggtggtgagcgtcgtggcggtgcccgtccattcaacggcgagcgtcgcgaaggt
gcaccagcaccacgccgttctttcggtgagcgtcgtgaaggcggtaatgctgccggtggc
gaacgccgtggcggtaacttcaaccgtgacaagccagcaccacgccgtgacgatgcagca
gctcctgccgcaccacgtcgccgtttcggtgatgcataa
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