Serratia fonticola DSM 4576: WN53_11910
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Entry
WN53_11910 CDS
T04030
Name
(GenBank) ATP-dependent helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
sfw
Serratia fonticola DSM 4576
Brite
KEGG Orthology (KO) [BR:
sfw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfw03021
]
WN53_11910
Transcription machinery [BR:
sfw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
WN53_11910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AKG69758
UniProt:
A0A0F7HAP5
LinkDB
All DBs
Position
complement(2671589..2674495)
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDVRMVTLLFPATGENRLYARNDSPITRVMFNPGDT
ISNHEGWQLQVEEVKEDNGLLTYIGTRLDTQESGVAMREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRFRARKYQSEQYRLPFAGLRGMRASLIPHQLHIAYEVGQRHAPRVLLADEVG
LGKTIEAGMIIHQQLLAGRAERVLIVVPETLQHQWLVEMMRRFNLYFSLFDDSRYSEAML
DSSNPFETEQLVICSLDFVRRNKQRLEQLADAHWDLLVVDEAHHLAWSEDAPSREYQVIE
QLAEHIPGVLLLTATPEQLGQQSHFARLRLLDPSRFHDYQEFVTDQQKYRPVADAVTLLL
SGERLADDKLNLLGELIDEQDIEPLLKAANSDTDNSEQARQELVTMLMDRHGTSRVLFRN
TRNGVKGFPRRHLHQIKLPLPTQYQTAIKVSGIMSAKKTVEARARDMLYPEQIYQEFEGE
NATWWNFDPRVEWLLDYLVANRHEKVLVICAQAATALQLEQVLREREAIRAAVFHEGLSI
IERDRAAAYFASQEEGAQVLLCSEIGSEGRNFQFASQMVMFDLPFNPDLLEQRIGRLDRI
GQMHDIQIMVPYLENTAQAVLGRWFHEGLDAFEHTCPTGRPIYDSCYEQLIGYLAAPTEQ
EGLDEFIHACNQQHKQLKTQLEQGRDRLLEMHSNGGDKAQALAEAIAAQDNDVNLVSFAL
NLFDIVGINQEDRSDNLIVLTPSDHMLVPDFPGLPQDGCTVTFDREQALSREDAQFVSWE
HPIIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLVELVYVVEAQAPKHLQLTRFLPPTP
IRMLMDRKGTNLAAQVEFESFNRQLNAVNRHTSSKLVNAVQQEVHVMLQQAESLVEEQAR
ALIEQAKQEADDKLSTELARLEALKAVNPNIRDDEVEALEFNRKQVLINLNEAGWRLDAI
RLVVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacggaaagcgaattgggactggga
accgtggtcgcactggacgtgcgcatggtcaccctgcttttccccgcaaccggtgaaaac
cgcctctatgccagaaacgactcgccaatcacccgcgtgatgtttaacccgggcgacacc
atcagcaaccacgaaggctggcagttgcaggtggaggaagtcaaagaggataacggtctg
ttgacctatatcggcacgcgtctggacacccaggaaagcggcgtcgctatgcgtgaggtg
ctgctggacagtaagctgaccttcagtaaaccgcaagaccgcctgtttgccggtcagatt
gaccgcatggatcgctttgcgctgcgtttccgcgcccgcaaataccagagcgaacagtat
cgcctgccgttcgctggcctgcgtggtatgcgcgccagcctgatcccgcaccaattgcat
atcgcctacgaagtcggccagcgccatgcgccgcgagttctgttggccgatgaagtgggc
ctgggtaaaaccatcgaagccgggatgattattcatcaacaactgctggctggccgcgcc
gaacgcgtgctgatcgtggtgccggaaaccctgcaacaccagtggctggttgaaatgatg
cgtcgcttcaacctctatttctcactgtttgacgatagccgctattccgaagcgatgctc
gacagcagcaacccgttcgaaaccgaacagttggtgatctgctcgctggatttcgtgcgt
cgcaacaaacagcgccttgagcagttggccgatgcccactgggatctgctggtggtagac
gaagctcaccacctcgcctggagcgaagacgcgccgagccgtgaatatcaggtgattgaa
cagttggcggaacacatcccgggcgtactgttgttgacggcaaccccggagcagcttggc
cagcaaagccactttgcccgcttgcgcctgctggatcccagccgtttccatgactaccag
gagtttgtcaccgatcagcagaaataccgtccggtagccgatgcggtgacgctgctgctg
agcggcgagcgcctggcggatgacaagctgaacctgctgggtgagctgatcgacgagcag
gacattgaacccctgctgaaagcggccaacagcgataccgacaacagcgagcaggcacgc
caggaactggtcaccatgctgatggatcgccacggcaccagccgcgtgctgttccgtaat
acccgtaacggcgtaaaaggcttcccacgtcgccacctgcaccagatcaaactgccgttg
ccaacgcaatatcagacagcgatcaaggtgtccggcatcatgagcgccaagaaaaccgtc
gaagcccgcgcccgcgacatgctctacccagaacagatttatcaggagttcgaaggggag
aatgcaacctggtggaacttcgatccgcgcgttgagtggctgctggattatctggtcgcc
aaccgtcatgagaaagtattagtgatttgcgcccaggcagcgaccgctctgcaactggag
caggtgctgcgtgagcgcgaagcgatccgtgccgccgtgttccacgaagggctgagcatt
atcgaacgcgatcgcgccgccgcctacttcgcttcacaggaagaaggcgcgcaggtactg
ctgtgctccgaaatcggttcggaagggcgtaacttccagtttgccagccagatggtgatg
ttcgatctgccgttcaacccggatctgctggaacagcgtattggccgtctggatcgtatt
ggccagatgcacgacatccagatcatggtgccgtacctggaaaacaccgctcaggccgtg
ctgggccgctggttccatgaagggctggatgccttcgagcacacctgtccaaccggccgg
ccgatttatgacagctgctacgagcaactgattggctacctggccgcccctaccgagcag
gaaggtctggacgagtttatccatgcctgtaaccagcagcacaaacagctgaaaacgcag
ctggaacagggccgtgaccgtctgctggaaatgcactccaacggcggtgacaaagcgcag
gcgctggcggaagccattgcggcacaggacaacgacgttaacctggtgagctttgcgctc
aacctgttcgatatcgtcggcatcaatcaggaagaccgcagcgacaacctgatcgtccta
accccatccgaccatatgctggtaccggacttcccggggctgccgcaggatggctgcacc
gtgacgttcgatcgcgagcaggcgctgtcgcgtgaagatgcccagtttgtcagttgggaa
cacccgattatccgcaacgggctggatctgatcctctccggcgataccgggagctgtgca
gtttccctgttgaaaaacaaggcgctgccggtgggcaccctgctggtcgaactggtgtat
gtggttgaagcccaggcccctaaacacctgcagctgacccgcttcctgccgccaacgccg
atccgcatgttgatggatcgcaagggaaccaacctggcggcacaggtcgagtttgaaagc
tttaaccgccaactgaacgcggtcaatcgccacacgtccagcaagctggtcaacgcagtg
cagcaagaagtgcacgtgatgctgcaacaggcagaaagcctggtggaagaacaggcgcgc
gccctgatcgaacaggccaagcaagaggccgatgacaagctgagcaccgagctggcacgt
ctggaagccctgaaagcggttaacccgaatatccgtgatgacgaagtcgaagcgctggag
ttcaaccgcaagcaggtgctgattaacctcaacgaagcgggatggcggctggatgctatt
cgcctggtcgtggtgacgcaccagtga
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