Serratia fonticola DSM 4576: WN53_12505
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Entry
WN53_12505 CDS
T04030
Symbol
rumA
Name
(GenBank) 23S rRNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sfw
Serratia fonticola DSM 4576
Brite
KEGG Orthology (KO) [BR:
sfw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfw03009
]
WN53_12505 (rumA)
Enzymes [BR:
sfw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
WN53_12505 (rumA)
Ribosome biogenesis [BR:
sfw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
WN53_12505 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
PCMT
RrnaAD
Methyltransf_25
TRM5-TYW2_MTfase
MTS
Methyltransf_11
Cons_hypoth95
FtsJ
Methyltransf_4
CMAS
Methyltransf_15
Methyltransf_23
DOT1
Motif
Other DBs
NCBI-ProteinID:
AKG69865
LinkDB
All DBs
Position
2809341..2810678
Genome browser
AA seq
445 aa
AA seq
DB search
MAQFYSPKRRVTTRQASQIFTVTVTDLDPFGQGVARHEGKAVFVPGVLPGEQAEIQLTQD
KRQFAKGQLRQLLNCSIQRVEPRCPHFGVCGGCQQQHVSEALQQQSKAAALGRLICRETG
VTPQQEPVIAGPQYGYRRRARLGLQWQPQQHRLLMGFHQAASSDLVAVKQCPVLAPELER
LLVPLYQCLSGLQAVQRLGHAELVLADNGPVLVLRHLDALKQGDHQALQQFAQQNGTTVY
LAPDSDRLEKLCGEAPYYQVDGLRLDFNPRDFIQVNDAVNQQMVAQALEWLEIEPNDRIL
DLFCGMGNFTLPLAKRAKAVVGIEGVATLVANGQYNADRNRLSNVSFFHENLEDDVARQP
WAAQGFDKVMLDPARAGAAGVMSHIVKLAPERVVYISCNPTTLARDSKVLLDAGYRLARV
RMLDMFPHTGHLESMALFIHGARKK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctccgaaacgccgcgtgacgacccggcaagcttcacaaatattc
acggtgacggtaacggacctcgatccatttggccagggagtggcgcgccatgaaggcaaa
gcggtatttgtccccggagttttaccgggggaacaggccgaaatccagttaacgcaggac
aaacgacagttcgccaaaggtcaactcaggcaactgttaaattgcagcatacaacgtgtt
gagccgcgctgcccacactttggtgtgtgcggaggttgccagcagcagcatgtctccgag
gcgctgcaacagcaaagcaaggcggcggcgctggggcgcttgatctgccgcgaaactggg
gtgacgccgcaacaggaaccggtgattgccgggccacaatatggctaccgtcggcgggcg
cggctggggttacagtggcaaccccagcagcatcgtttgctgatggggtttcaccaggcc
gcctcgtccgatctggtggcggtgaagcagtgcccggtattggcaccggaactggaacgg
ctgctggtgccgttgtatcaatgtctgagcggcttgcaggccgtgcagcgtttgggccat
gcggagctggtgttggcggataacggaccggtgctggtgttgcgccacctggatgcgctc
aagcagggcgatcatcaggctttgcagcagtttgcccagcaaaatggcaccaccgtttat
ttggcaccagacagcgatcggctggaaaaactgtgcggtgaagcgccgtattatcaggtt
gacgggctacgcttagacttcaatccgcgcgattttattcaggtaaatgatgcggtaaat
cagcaaatggtggctcaggcccttgaatggctcgagattgagcccaatgatcgcatattg
gatctgttttgtggcatgggcaactttaccctgccgctggccaagcgggccaaggcggtg
gtcgggattgaaggtgttgccacgctggtagcgaatgggcaatataatgccgataggaat
aggctcagtaatgtctcctttttccatgaaaatctggaagatgacgttgcgcgacaacca
tgggcagcacagggatttgataaggtgatgctggacccagcccgcgcaggtgcggctggg
gtgatgtcacatattgtaaaactggcgccagagcgcgtggtgtatatatcctgtaacccc
acgacattggcacgcgacagcaaagtgttgctggacgccggttatcgtcttgcgcgtgtg
cggatgttggatatgttcccgcacacggggcatcttgaatccatggcgctgtttatccac
ggggcgcggaaaaagtag
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