Serratia fonticola DSM 4576: WN53_12690
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Entry
WN53_12690 CDS
T04030
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sfw
Serratia fonticola DSM 4576
Brite
KEGG Orthology (KO) [BR:
sfw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfw03016
]
WN53_12690 (truD)
Enzymes [BR:
sfw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
WN53_12690 (truD)
Transfer RNA biogenesis [BR:
sfw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
WN53_12690 (truD)
Prokaryotic type
WN53_12690 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AKG69900
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Position
2852684..2853730
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AA seq
348 aa
AA seq
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MDMANLTWLHGKPVATGVLKANPEDFVVVEDLGFSPDGEGEHLLVNIRKNGCNTQFVADY
LAKFAGIHARSVSYAGLKDRHAVTEQWFCLHLPGKESPDLSQFALEGCEVLQAARHLRKL
RIGTLKGNEFTLVLRQISDRQEVEQRLQAIAAGGVPNYFGSQRFGRGGNNLTMARRWAND
EIRVKERSKRSFYLSASRSALFNFITSQRLANQQQQTVLEGDALQLAGRGSWFVAKAEEL
ATLQQRLDAGELMITAPLPGDGEPGTAAEVLEFEQSCLAQQPELLSLLKRERVEPARRAL
LLQPQKMQWNWWDDVTVELRFWLPAGSFATSVVREIMQLASGEADIAE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggacatggctaatctgacctggttgcacggcaagccagtggctaccggcgtgctgaaa
gccaacccggaagactttgtggtggttgaggatctgggtttttccccagatggtgaaggt
gaacacctgctggtgaacatccgcaagaacggctgcaacacccagtttgtggcggactat
ctggcgaaatttgccggtattcatgcccgttcggtcagctatgccggtttgaaagatcgc
catgcggtcaccgagcagtggttctgtctgcatctgccggggaaagaatctcccgatctc
agccagtttgcgctggaaggctgcgaagtgttgcaggccgctcgccatctacgcaagctg
cgcattggtacgttgaaaggcaacgaattcaccctggtgctacgccagattagcgatcgc
caagaggtggagcagcgtttgcaggccatcgcggcaggcggcgtgccgaactacttcggt
agccagcgttttggccgtggtggtaataacctgacgatggcgcgccgctgggccaacgat
gagatccgggtcaaggagcgcagcaaacgcagcttctacctgtctgccagccgtagcgcg
ttgttcaacttcatcaccagccagcgcttggctaaccaacagcagcaaacggtgctggaa
ggggatgcgttgcagcttgccgggcgtggtagctggttcgtggccaaagcggaagagtta
gccaccctgcaacaacggctggacgcgggtgaactgatgatcaccgctccgttaccgggg
gatggtgagccgggaaccgccgcagaggtgctggagtttgaacaaagttgtctggcacaa
cagccggaattgctgagtttgttaaagcgtgagcgcgtagagcctgcgcgacgggctttg
ctgctacagccgcagaaaatgcagtggaactggtgggatgatgtcaccgtggaattacgt
ttctggctaccggcgggcagtttcgcgactagcgtggtgcgcgaaataatgcaattggct
agtggtgaagcggatattgccgagtaa
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