Serratia fonticola DSM 4576: WN53_18620
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Entry
WN53_18620 CDS
T04030
Name
(GenBank) type IV secretion protein Rhs
Organism
sfw
Serratia fonticola DSM 4576
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
AHH
PAAR_motif
DUF6531
TEN_YD-shell
HNH_2
UPF0257
DUF1150
RNA_pol_Rpb2_3
Motif
Other DBs
NCBI-ProteinID:
AKG70974
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All DBs
Position
4202254..4206717
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AA seq
1487 aa
AA seq
DB search
MQQDIIQRIARVGAMNAASGPAPLTSQAGPAAARLGDQIKHKSFLGALLGAVTGALIGAA
IFAAAGLLIAGTGGLATVAVLALGTAGTMAMGGVISRASGAVADFVDSVGSMDGPISTAS
SNVYIEGKQAARAIVDMVACTKHSSPPKIAQGSESVFINDQPAARVGDKVTCGATIKEGA
SSVYVGSGQGSYLEIDEEFSWWEKAILVAVEFLVPPSRGMLKGIGKLFTKAGRAAVVSGA
KMGARQVAKIASGKTFRCATNAFKGGKGLKRFSEAGKKFVKGDPIDVTNGSLVEQRTDIE
LGQTLPLWFTRTWAPGCGHTYALGQGWTDSFHQYVEVNATEDVIEVTTQEGSALYFALPK
GHQVSVNPDHPDFSLHRHPQGWELVDRRSRTSQWFTLAVRQQGQTRYLLTRQSDNNGNVL
TLSHDKNNRLLQVTHSDGIELELRWHASGYLAEIIRVDGGLQDSLARYQQNEEGFLTEAD
SQQFYHLYYSYNSQGLMSRWHDNDQTWVDYQYDEKGRCITSIGAGGYYPVSFQYQPGITL
VSDSQGRTTRYEYNEQLKVTAIEDPQGNRTGFTYDNFGNLIEQTSPSGRVTRLEYLKETG
LVSAFYDAAGACWRYSYDDLERLTAMTDPLERVWWQEYDEQGNPSRFIAPDGTTTTLSRN
AFGLITQVADSEGNQQTARYDERNRLCSLFDEENRGLHLRYTTRDDLRSLSHAGGALWRY
RYDNHRRLAVSDRPNNSLEQFTHDRHGNLTHYQDANGVEWRVDYGPFDLPMARTDGEGQR
WQYRYDPDHLQLIEVINPQGESYRYQLNASGQVVTEQDYAGTEWQYVYDKDGQCVEKRDA
LGQVSRFQYDAAGRLCSLHTPEGETQYQYDVLGRLLSVVAPASELSFEYDLQGRVVRETQ
NGRVIRREYPDRQTQTRHLEMPEDEAMQPALSTTLRTNRVGEWLSLQLPQQAETQALRVT
RNDNGQDTERKAGDGFMLRNQYDLMGQLVHQRAGRQTRIFTPEEVQDIPQPVLAGLDRSY
CYDRALNLVAANDDLERLSYVVNANRQVVSVSEGNQLQEHYNYDASGYPTQQRVNNPRAL
FSVSNEDVYLRGHRLSQAGDSSFEYDDAGRMIARWQHKGGYRPEETRYSWDSRNQLIALK
KPHGEVWHYRYDPFGRRTEKVCEQKGLRTLYLWDGDSIAEIREYKNAQLQRIRHWVFDGW
ELLAQQEWTQPNVLPFDGRAVADESEARVYTTLYAVCAPNGQPLALFNTEGKAQWRKPAA
SLWGMALSKATVNVQLDPGLKFAGQLLDEESGLFYNRYRYYLAEAGCYLTPDPIGLAGGE
NTYGYVHNPLSWVDPLGLAGCSTTLGRNMMEAMGLPRSTKWTGHQAHHIIPKELANHPAL
KKIKYYIDDAGNGIFLRRVDDGTSAMARHQGSHDGYTQAVKNALDKIDLNQSKDAILNQV
KEIQGISRKGLENGYPIRPLDMDKAGGALGNGKVNAVWTNIFTKGGW
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagatatcatccagcgtattgcccgggtcggtgcaatgaatgctgccagcggg
cctgcacctctcacttcgcaagcgggccctgctgcggcacgtcttggcgaccagattaag
cacaagagttttttgggggcgctacttggggccgtcaccggagcgctgatcggtgctgct
atcttcgctgccgcgggtcttttgatcgcaggcactggcgggttggcaactgtcgctgta
ctggcactaggaacggcaggcaccatggcgatgggaggggtgatcagccgggctagcgga
gcagtggcagattttgtcgatagtgtgggctccatggatggccctatctccactgcgtca
tctaatgtgtatatcgaaggtaaacaagccgccagagccatcgtcgatatggtggcctgc
accaaacacagttcacccccaaaaattgcccagggcagtgagagcgtatttattaatgac
caacccgccgcacgggtgggggataaagttacctgcggtgccaccatcaaggaaggggcc
agcagcgtttatgtaggctctgggcagggcagttatctggagatagatgaagaattctcc
tggtgggaaaaggccattctggtcgcagtagaattcctggttccccccagccggggtatg
ctgaaaggcattggtaaactgtttaccaaagctggccgtgctgccgtagtaagcggcgca
aaaatgggggcgaggcaggtggcgaagatcgcttctggcaaaactttccgctgtgctact
aatgcgtttaaaggaggaaaaggcctaaaacgctttagcgaagccgggaaaaagtttgtt
aaaggcgacccgattgatgtcaccaatggcagcctggttgaacagcgcaccgatattgag
ctggggcaaaccttgccgctgtggtttacccgtacttgggccccaggctgtgggcacacc
tacgcgcttgggcagggctggactgacagtttccaccaatatgtcgaggtcaatgcgact
gaagacgtgattgaggtcaccacgcaagaaggtagtgcattgtattttgcgctgcccaaa
gggcaccaggttagcgtaaatcccgatcatcctgacttctccttacatcgccatccacag
ggatgggaactggtcgacaggcgaagccggaccagccagtggtttactctggctgtgagg
cagcaagggcaaacacgttacttactcactcgccagagtgataataacggcaacgttctc
actctttcccatgataagaacaaccgtttactgcaggttacccacagcgacggcattgag
ttagaactgcgctggcatgccagtggttatctggcggagattatccgtgtggatggcggt
ttgcaggatagcctggcccgttatcagcaaaacgaagaaggtttcctgaccgaagctgac
agccagcagttctatcacctgtactacagctacaattctcaggggctaatgagccgctgg
catgataatgatcaaacctgggtagattatcagtacgatgagaagggccgctgcattacc
agcattggagcggggggatattacccggttagcttccagtatcagccagggatcactctg
gtcagcgatagccaaggacgcaccacacgctatgaatataacgagcaacttaaggtcacg
gcgatagaggatcctcaggggaaccgtactggcttcacctacgataactttggcaacctg
attgagcagacctcaccgtctggccgggttacccggctggagtatctgaaagaaaccggg
ttggttagtgcgttttacgatgcggccggggcctgctggcgttatagctacgacgatctg
gaacgcctgacggcgatgaccgatccgctggagcgtgtctggtggcaggaatacgatgag
cagggtaacccgtcccgctttatcgcaccagatggcaccaccactaccctgagtcgcaat
gcgtttggcttgatcacacaagtggccgatagcgagggcaatcagcaaaccgcgcgctac
gatgagcgaaatcgcctctgcagcctgtttgatgaagaaaaccgcggcctacatctacgc
tacaccacacgagatgatctgcgaagcctttcccatgcaggcggtgcgctgtggcgctat
cgctatgataatcaccgtcggttggcggttagcgatcgtcccaacaacagccttgagcag
ttcacccacgatcgccatggcaacctgacgcactatcaggatgctaatggggttgagtgg
cgggtggattacggcccgttcgatctgccgatggcgcgcacggacggggaagggcaacgc
tggcaatatcgttacgatccagatcatttacaactcattgaagtgattaatccgcaaggg
gagagctatcgctatcagctcaacgccagtggccaagtagtgactgagcaggactatgcg
ggcactgagtggcagtatgtctacgataaagacgggcagtgcgtagagaaacgcgatgcc
ttggggcaagtcagccgttttcagtacgatgcagcgggccggttatgttctctgcatacc
ccagagggggaaacccagtaccaatatgatgtccttggccgtttgttgagtgtggtagcg
cccgctagtgaactgagttttgagtatgatttacagggccgggtggtgcgtgaaacgcaa
aatggccgggtgatccgtcgggaatatccggatcggcagacgcaaacccgccacctggag
atgccggaagacgaagcgatgcagccagcgttgagtaccacgctgcggactaaccgagtc
ggcgaatggttatccttgcaactgccgcagcaagcggaaacacaggcattgcgggtaacg
cgaaacgacaatgggcaggataccgagcgtaaggctggcgacggctttatgctgcgtaat
cagtatgacctgatggggcaattggtccaccaacgggcaggtcggcagacacggatattt
actccggaagaggtgcaggatattccccagcctgttttggcggggttggatcgcagctac
tgttatgaccgtgctttgaacctggtggcggccaatgacgaccttgagcgcttaagctat
gtggtgaacgctaaccggcaggtggtctcggtgagcgagggtaaccagttgcaggagcac
tacaattacgatgccagtggctatccgacgcagcaaagggtgaacaatccacgggccctg
ttctcggtttcgaatgaggatgtttacctgcgggggcataggctgagtcaggcgggtgac
agtagctttgagtatgatgatgcgggtaggatgattgcccgatggcagcataaagggggc
taccgaccagaggaaacacgctatagctgggacagccgtaatcagttaatagcattgaaa
aagccgcatggcgaagtgtggcactatcgttatgatccctttggccgcaggacagagaaa
gtctgcgaacagaaagggttgcgaacgctttatctgtgggatggtgatagcatcgcggag
ataagggagtataaaaacgcgcaattacagcgcattcgccactgggtgtttgatggttgg
gagttgttggcccagcaggaatggacccagccgaacgtactgccgtttgatggtagggcc
gtggctgacgaaagcgaagcgcgggtttatactaccctctatgcggtatgtgcccccaac
ggtcaaccgttggcgctctttaacactgaaggaaaagcacaatggcgcaagcctgcggca
tcactgtggggtatggcgctgagcaaggccacggtgaatgtgcagttggatccggggctg
aagtttgcaggtcagttgttggatgaagagagcgggctcttttataaccggtatcgttac
tacctggccgaggcgggctgttatctgacgccggacccgatagggctggcggggggagag
aatacttacggatatgtacataatcccctgtcatgggtcgatccattaggcttagccgga
tgctctaccacacttggtaggaacatgatggaggcgatgggactgccgcgttctacgaaa
tggactgggcatcaagcccaccatataatcccgaaagaattagctaaccatccagcatta
aagaagatcaaatattatattgatgatgccggaaacggtatcttcctcagaagagtcgat
gatggcactagtgcgatggcaaggcatcagggaagtcatgatggatatacacaagcagtt
aaaaatgctttggataaaatagatcttaatcaatctaaagacgctattttaaatcaagtg
aaagaaatccaaggaatttctcggaaagggttagagaatggctacccaatcagaccactt
gatatggataaagcaggtggtgcattaggaaatggaaaggttaatgctgtctggactaat
attttcactaaaggtggctggtaa
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