Serratia fonticola DSM 4576: WN53_21925
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Entry
WN53_21925 CDS
T04030
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
sfw
Serratia fonticola DSM 4576
Brite
KEGG Orthology (KO) [BR:
sfw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfw03016
]
WN53_21925
Enzymes [BR:
sfw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
WN53_21925
Transfer RNA biogenesis [BR:
sfw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
WN53_21925
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
AKG72679
UniProt:
A0A0F7HIA0
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All DBs
Position
4952723..4954657
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRVEGVVKGTEKGFGFLEVDGQKSYFIPPPYMKKVMHGDRI
VATLHTEKEREIAEPETLVEPFLSRFVGRVQKKDDRLSIIPDHPLLKDAIPCRPAREVTH
NFQAGDWAVAEMRRHPLKGDRTFNADLTQFITDGEDHFAPWWVTLARHNLEKEAPDMVAI
SEQETALVREDLTALDFVTIDSASTEDMDDALHVQDNGDGSLLLTIAIADPTAYVEQGSN
LDEIARKRAFTNYLPGFNIPMLPRDLSDNLCSLRPNERRSVLACRVTIAADGALGNDIHF
FAAEIESKAKLVYDEVSDWLDGIAGWQPPSESIAQQITLLKQVCDARSAWRHQHALVFKD
RPDYRFVLGEKGEVLDIVTEQRRTANRIVEECMIAANVCAALVLRDRLGFGIYNVHNGFD
PALVEQAVTVLQANGVEADAEKLLTLEGFCELRRHLDSQPTQFLDSRIRRFQTFAEISTT
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIISEQAAEKPQDDVTVQLAERRRLNRM
AERDVGDWLYARFLKDKAGTDERFNAEIIDVTRGGLRVRLLDNGAMAFIPAPFIHAVRDE
MVCSQETGTVQVKGEVVYRQSDSLQVNIAEVRMETRSVIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccgctgctggcgcagcttaaacagcaacttcactctcaaaccccg
cgtgttgaaggcgtagtaaaagggactgagaaaggttttggctttttagaagtcgacggg
cagaaaagttacttcattccgccgccgtacatgaaaaaagtcatgcatggggatcgtatc
gtcgccaccctgcataccgaaaaagagcgcgaaatcgctgaaccggaaaccctggttgag
cctttcctgtcgcgctttgttggccgggtgcagaaaaaagacgatcgcctgtcgattatc
cccgatcatccgttgctgaaagacgcgatcccatgccgtccggcgcgtgaagtgacccat
aatttccaggccggtgactgggccgtcgcagaaatgcgccgtcatccgctgaaaggcgat
cgcactttcaatgccgatctgacccagttcatcaccgacggtgaagatcacttcgcgccg
tggtgggtcacgctggctcgtcataatcttgaaaaagaagcgccagacatggtcgcgatc
tccgaacaagagaccgctctggtccgtgaggacctgaccgcactggacttcgtcaccatc
gatagcgccagcaccgaagatatggacgatgcgctgcacgtgcaagacaacggtgacggc
tcgctgttgttgaccatcgccattgccgatcctaccgcctatgtcgagcaaggcagcaat
ctggatgaaatcgcccgcaagcgcgcgttcaccaactacctgccgggcttcaatattccg
atgttgccgcgcgatctgtccgacaacctgtgctcgctgcgcccgaatgaacgccgctcg
gtgctggcttgccgcgtgactatcgccgcagacggtgcgctgggcaacgatatccatttc
ttcgcagccgaaatcgagtccaaagccaaactggtttatgacgaggtatctgactggctg
gacggcatcgctggctggcagccaccgagcgagagcatcgcacagcagatcaccttgctt
aaacaggtttgcgatgcacgcagcgcctggcgccatcagcatgcgctggtattcaaggat
cgcccggactaccgctttgtcctcggcgagaaaggcgaagtgctggacatcgttaccgaa
cagcgtcgcaccgccaaccgtattgttgaagaatgcatgatcgctgccaacgtctgtgcc
gccctggtgctgcgcgatcgtttgggctttggcatctataacgtgcataacggctttgat
ccggccctggttgagcaagcggtcaccgtattgcaggccaacggcgttgaagccgatgcc
gagaagctgctgaccctggaaggattctgcgaactgcgccgtcacctcgactcgcagcca
acccagttcctggacagccgtatccgccgcttccagacctttgccgagatcagcaccacg
cctggcccgcacttcggtctggggctggaggcatatgccacctggacctctccgatccgt
aagtatggcgatatggtcaaccatcgtctgctgaaagccattatcagcgagcaagcggcg
gaaaaaccgcaggacgacgtcaccgtacagttggccgaacgtcgccgtttgaaccgcatg
gctgagcgcgacgttggtgactggttgtatgcccgtttcctcaaggataaggccggaacc
gatgagcgcttcaacgccgagatcatcgacgttacccgtggcggcctgcgcgtacgcctg
ctggacaacggcgcgatggcctttatccctgccccgttcatccacgcggttcgcgacgag
atggtgtgtagccaagagaccggcaccgtgcaggtgaagggtgaagtggtttatcgccag
agcgatagtttgcaggtgaacattgccgaagtgcgcatggaaacccgcagcgtgatagcc
aggcccgtagcctaa
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