Serratia fonticola DSM 4576: WN53_22600
Help
Entry
WN53_22600 CDS
T04030
Name
(GenBank) transcriptional regulator
KO
K17473
sigma-54 dependent transcriptional regulator, dga operon transcriptional activator
Organism
sfw
Serratia fonticola DSM 4576
Brite
KEGG Orthology (KO) [BR:
sfw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfw03000
]
WN53_22600
Transcription factors [BR:
sfw03000
]
Prokaryotic type
Helix-turn-helix
Other families
WN53_22600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
AAA_5
Sigma54_activ_2
AAA
AAA_22
Mg_chelatase
NACHT
RuvB_N
AAA_2
AAA_14
AAA_16
IstB_IS21
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AKG71696
LinkDB
All DBs
Position
complement(5094141..5096951)
Genome browser
AA seq
936 aa
AA seq
DB search
MKRKDAVRQELERLTLTLSRETLEQSAGGFAAETIAFNLGLARNSVSKDLNELHGERLVI
KIKSRPVLFLHRAVCEQLIEQSLPDDRLEAKDLLDLLPAKSLPQPASDDPFHTVIGYDRS
LRLSVEKGKAAVLYPGGLHVLLTGPSGVGKTFFAEVMHQFATVQQPQRQIPLVYFNCAEY
AHNPELLSSHLFGHKQGAFTGAIESKRGLIEQADGGFLLLDEVHRLPYEGQEKLFSILDK
GEYRPLGSSDKARPISVRLICATTESPDSTLLRTFLRRIQVSIAIPALRERSLEEQVEII
TGFLQLESRKIGRIIRLDKGLLLYLLEKPLSGNIGQLKSDIQFLCAQAWASGMGHSSPRL
LLDKRLMDVPHSASASSRLLVDALFGQQEYLDISSQPLEQLKQHLSALSSEQDSDLFYTY
LTREYVNLRNSNVPPQETLSILKNKLRTIFEYGLYSRNGGESEERYYGGQVEQRITLLIG
CIEQVLGFPLPQNMAGHLRKHLLALLSYVQKGLIPNLYSSSLILDYCKDEYDNANQLCRK
INEIFHIQCPSTEIVYLCLFLKECRSFRQRKEVNPDCGAMLIGHGTTTASSMAHYVNRVL
ECELFTAIDMPFEQSVHDTLELLIATLREKRYQRLILIVDIGSLVHFASTVSKLFHIDVL
LIQNITMGALLEIGLDLTYETSDFAPLMQLMASKGIAHQLYDQREDETGKVLAISCITGM
GTAVKIKKVLEESFGELMAEDTRMVLVDYNEVRSLERLRQAIGGNERLVGIVGTFQPGLP
DIPFIALEELFSEQGPELVLSLLNPDLGSAERQLQVERCSMRFISALTLESIINHISVLN
PQRILQEIQAVLHQICRTLDLQPSRQVTLRFLIHCCCMVERIVLSHKPLQIALDAQQDID
QQAFSVIKDAFSPIERAYSIRLSDAEYFYIYELLYR
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtaaagatgcagttcgccaggagctggaacgtcttacccttacgcttagccgg
gaaacgcttgaacaaagcgctggcggtttcgccgcggaaaccatcgctttcaacctggga
ttggcacgtaactccgtcagtaaagatctcaacgagctgcacggtgagcggttggtcatc
aagattaaatcccgtcccgtgctgtttttgcaccgggcagtctgcgagcagttgattgag
cagtcgctgccagatgacaggctggaagccaaagatttgctggatctattacccgccaaa
tccttgccgcagccagccagtgatgacccttttcatacggtaattggttatgaccgcagt
ctgcggttgtcagtagagaagggcaaggcggcggtgctttatcccggtggattgcatgtg
ttgcttaccgggccttccggggtggggaaaaccttctttgccgaggtgatgcaccaattc
gccacggtgcaacagccacagcgccaaatcccgttagtgtatttcaactgcgccgagtat
gcccataacccggagctgctttcatcccatctgtttggtcacaaacagggcgcgtttacc
ggtgcgattgaaagcaaacgtggtctgatcgaacaggcggacggcggctttctgttgctc
gatgaagttcaccgcttgccctacgaagggcaggagaaactgttttcgatcctcgataaa
ggtgaatatcggccactgggttcaagcgataaagcccgacccatcagcgtacggctgatt
tgcgccaccaccgaaagcccagactcaacgctgctacgcactttcctgcgacgtattcag
gtgtcgattgccataccggcactgcgggaacgatcgctggaggaacaggtagaaatcatt
accggtttcttacagctcgagagccgcaaaattggccgtattatccgcctggataaggga
ttactgctctatctgttggagaaaccgctgagcggcaacatcggccaactcaaaagcgat
atccaattcctctgtgcccaggcttgggccagcgggatgggacacagtagcccaaggctg
ttgctggataagcggctgatggatgtcccgcactctgccagcgcaagcagccgcctgctg
gtggatgcgctatttggtcagcaggagtatctggacatcagttcacagccgctggagcaa
ctcaagcagcatctgagcgccttaagcagcgagcaggacagcgatctgttttatacctat
ctgacgcgcgaatacgtcaacctgcgcaacagcaacgtgccgccgcaggaaaccctgtcg
atcctgaagaacaagctacgcaccatttttgaatatgggctgtacagccgcaacggtggg
gaaagtgaggaacgctattatggcggccaggttgagcaacgcatcaccctgttgatcggc
tgtatcgaacaggtgttgggattcccgctgccgcagaatatggcaggccatctgcgtaaa
cacctactggcgctgctttcctacgtgcagaaagggctgatccctaacctgtactcctcc
agcctgatcctggattactgtaaggatgagtacgataacgccaaccagctatgccgcaaa
atcaatgaaatcttccacatccaatgcccatcgacggaaatcgtctacctgtgtctgttt
ttgaaggagtgccgtagcttccgccagcgcaaggaggttaatcctgactgcggtgccatg
ttgatcggccatggcaccaccacggccagcagcatggcgcactatgtcaatcgtgtgctg
gaatgtgagctgtttaccgccatcgatatgccgtttgagcagtcggtgcatgacacattg
gaattactgatcgccacactgcgggaaaagcgctatcagcgcttgatcctgattgtggat
atcggctcgttggtgcactttgccagcaccgtcagcaaactgttccacatcgatgtgctg
ctgatccagaacatcaccatgggggcgttgctggagattgggctggatttgacctatgaa
accagtgatttcgcccccttgatgcaactgatggccagcaaagggatagcccatcagctt
tacgaccagcgtgaagatgagaccggcaaggtgttggcaatctcctgtatcaccgggatg
ggcacggcggtgaagatcaagaaagtgctggaggaaagcttcggtgagctgatggcggaa
gacacccgtatggtattggtggattacaacgaagtgcgcagcctggagcggttgcgtcag
gcgataggcggtaacgagcggctggtggggatcgtgggcaccttccagcctggcttgccg
gatattccgtttatcgcgttggaagagctgttctccgaacaggggccggaactggtgctc
agcctgttgaacccggaccttggcagcgcagaacggcagttgcaggtggagcgctgttca
atgcgctttatcagcgcgctgacgctggagagcatcatcaaccatatttccgtactcaat
ccccaacgtatcctgcaagagatccaagcggtgttgcatcagatttgccgcacgctggat
ctgcagccctcaaggcaggtgacacttcgcttcctgatccactgctgttgcatggtggag
cgtatcgttttaagccacaaaccgttacagattgccctggatgcccagcaggatatcgac
caacaggcgttttctgtcatcaaagacgcgttttcgccgattgaacgtgcctattctatc
cgcctgtccgatgcggaatatttttatatctacgagctactctaccgctaa
DBGET
integrated database retrieval system
