Serratia fonticola DSM 4576: WN53_24750
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Entry
WN53_24750 CDS
T04030
Name
(GenBank) DNA/RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sfw
Serratia fonticola DSM 4576
Pathway
sfw03420
Nucleotide excision repair
sfw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WN53_24750
03430 Mismatch repair
WN53_24750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfw03400
]
WN53_24750
Enzymes [BR:
sfw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WN53_24750
DNA repair and recombination proteins [BR:
sfw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WN53_24750
MMR (mismatch excision repair)
Other MMR factors
WN53_24750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
UvrD_C_2
AAA_30
NPHP3_N
AAA_11
SLFN-g3_helicase
T2SSE
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AKG72071
LinkDB
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Position
complement(5559906..5561804)
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AA seq
632 aa
AA seq
DB search
MDQGGLKLEPEVVDVLKHVSDGKSFLLSGGAGSGKTYSLVQIIGELLRTDPSAFIACITY
TNAAVREIESRISNERLSVSTIHDFLWSAISPYQAALRTVLIELMGCEPPKINPGSTVVS
DDMFSGKTIEYKEYRILDQGIISHDEIIILARGIFEKYPKIRDIMRDKFRYILVDEYQDT
APDVVTILLDHLSQSSRKGVCGFFGDTMQSIYDEGVGSIQSYVDSKMVAEVKKRQNRRNP
RLVYELANQLRTDGLLQHASEDENAPNMNGSTAKEGTIHFYYSFGETDKLGEVRKILKWN
FDEVLETKELNLTHNLIAPQAGFSNLMEIYDKDGVLAFRDRLVSFIKKYDDLECYDGFTF
GEVVTALQKNKAGKELASVSPTSQMQKFIDTHPGLLDEAKEHDFNVFRRMYVDKDLLIDD
KKQSEEDIARKGSQRCDFIKHVFKIQTVVHLYEQRRYNEFLRRTEFQLNRVDDKVRLKRC
IETIGAMRNSPIIDVIDFAHEHGLCVKDDRFHEFRQRKGYLFNRLVGVEYLAYKNLYEYL
EGRTAYSTQHKIKGREFDRVLVVLDSGGWNKYNFNYLFESNGTDTVRERTRKLFYVCCTR
AKDTLAVYFRNPSVATLVQARAWFGADNVIEV
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaggcggactgaaattggaaccggaagttgttgacgtactcaagcacgtcagc
gatgggaagagttttctgctcagcggaggggcgggaagtggtaaaacttattctttagtc
cagatcataggtgaactcctaaggactgatcctagcgctttcatcgcatgtatcacatat
actaatgctgctgttagagagatcgaatcccgtatttccaacgagaggctttcagtcagc
acaattcatgattttttgtggagcgcgatcagcccctatcaggccgctctacgtacagtt
ttgatcgagttgatgggttgtgagccacccaagattaatcctggtagtactgttgtgtcc
gacgatatgttttctgggaaaaccattgaatataaagagtatagaattctagatcagggg
attatttctcatgatgaaattattattctagctcgaggcatttttgaaaaatatccaaaa
attcgagacataatgcgtgataagtttcgatacatattggttgatgaataccaagatact
gctcccgatgttgtgactattttgctcgatcatctttctcaaagttcgcgcaaaggagtc
tgcggtttttttggcgatacaatgcaatctatttatgatgaaggagttggttcgatccaa
agttacgtcgatagtaaaatggtggcagaggttaagaagagacagaaccgccgcaatccg
cgcttagtttatgagttagcgaatcaacttcgaaccgatggtttgctacagcatgcgtca
gaagatgaaaatgcccctaacatgaatgggtctactgccaaagaggggactattcatttc
tattactcttttggtgagaccgataaactgggtgaggttcgcaagattctgaaatggaac
ttcgatgaggtattggaaactaaggaacttaatctgacccacaatcttattgcgccccaa
gctggcttcagtaacctaatggaaatatatgacaaggatggagtcctggcttttagagac
cgactagtgagtttcatcaaaaagtatgatgatttagagtgttacgacggctttacattt
ggagaggttgtaacagcccttcagaagaacaaagctgggaaagagctggcatctgtcagt
cctacatcacaaatgcaaaagtttattgatacccatccaggtttacttgatgaagcaaag
gagcatgatttcaatgtgttccgacgcatgtacgttgataaagacctgctcatcgatgac
aagaagcaaagcgaggaagatattgcacggaaagggtctcaacgatgcgacttcatcaaa
catgtattcaagatacagaccgtagttcatctttatgagcaacgacgatacaacgaattc
ttaagaagaacagaatttcagcttaatcgcgttgatgacaaagtgcggctgaagagatgc
attgagacgattggtgcgatgagaaatagtccaatcatagatgttattgattttgcccat
gagcacggcttatgcgtcaaagacgaccggttccacgaatttcgtcaacgaaagggttac
ctttttaacagactcgttggtgtggaatatttagcttataaaaatctttatgagtatctg
gaaggacgaacggcgtactcgactcagcataaaattaaaggtcgagaatttgaccgtgta
ctagttgttttagattcaggaggctggaataagtacaacttcaattaccttttcgaaagt
aatggcacagatacggttcgtgaacggacacgaaaattattttatgtatgttgcacgcgt
gcgaaagacactttagccgtttatttccgtaacccatcagttgcaacccttgtccaagca
agggcatggtttggtgctgacaatgtcattgaggtatga
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