Shigella flexneri 2457T (serotype 2a): S0205
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Entry
S0205 CDS
T00128
Symbol
dniR
Name
(GenBank) transcriptional regulator for nitrite reductase (cytochrome c552)
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
sfx
Shigella flexneri 2457T (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sfx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sfx01011
]
S0205 (dniR)
Enzymes [BR:
sfx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
S0205 (dniR)
Peptidoglycan biosynthesis and degradation proteins [BR:
sfx01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
S0205 (dniR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM_RLK
LysM3_LYK4_5
NMB0315_dom_I
LysM1_NFP_LYK
HTH_Tnp_1
DUF3071
Motif
Other DBs
NCBI-ProteinID:
AAP15739
UniProt:
A0A9P2MY95
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Position
complement(224640..225986)
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AA seq
448 aa
AA seq
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MKAKAILLASVLLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQARWMDDGTSIAPDGDLW
AFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYMYWIAGQVKKRNMPMELVL
LPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNYDARRDVVASTTAALNMMQRL
NKMFDDDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDFWSLPLPQETKQYVPKMLALSDI
LKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVADMAGISVSKLKTFNAGVKGSTLGAS
GPQYVMVPKKHADQLRESLASGEIAAVQSTLVANNTPLNSRVYTVRSGDTLSSIASRLGV
STKDLQQWNKLRGSKLKPGQSLTIGAQRLANNSDSITYRVRKGDSLSSIAKRHGVNIKDV
MRWNSDTANLQPGDKLTLFVKNNNMPDS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaaaagcgatattactcgcctctgtcctgctcgtgggttgccagagtaccggc
aacgttcaacagcacgcacagagcctttctgcagctggtcaaggggaagcagcaaagttt
acaagtcaggcacgatggatggacgatgggacgtctatcgcgccagatggtgacttgtgg
gctttcattggcgacgagctaaagatgggaattccggaaaatgaccggattcgcgaacag
aaacagaaatatttacgcaataagagctatctccacgatgtaactttacgggcagagccg
tatatgtactggatagcagggcaagttaaaaaacgtaacatgcctatggaactggtacta
ctacccatagtggagagcgcttttgatcctcacgcaacgtctggcgccaatgccgcaggc
atctggcagatcattccgagcacggggcgcaattatggtttgaaacagacccgcaattat
gacgcgcgtcgcgatgttgttgcttcaacaactgccgcgctgaatatgatgcagcgtctg
aacaaaatgtttgacgacgactggcttctgaccgtagcggcttataacagcggcgaaggt
cgggtcatgaaggcaattaaaacgaacaaagcgcgtgggaaatccacggacttctggtcg
ttaccgttgccgcaggaaacgaagcagtacgtgcctaaaatgctggcattgagtgatatt
ctcaaaaacagcaagcgttatggcgtacgtctgccaacgaccgatgaaagccgtgctctg
gcgcgtgtgcacctgagtagcccggttgaaatggcgaaggttgcagatatggcggggatt
tccgtcagcaagctgaagacattcaacgctggcgtgaaaggctccacgctgggcgcaagt
gggccgcagtacgtgatggtgccaaagaagcatgcagatcaactgcgtgaatctctcgct
tcaggcgaaattgctgctgtacagtcgacgctggttgccaacaatacgccgcttaacagc
cgtgtttacaccgtacgctctggcgacacgctttcaagcatcgcttcacgtctcggcgta
agcaccaaagatttgcagcagtggaacaaactgcgcggatctaagctgaagccaggccaa
agtttgacgattggtgcacagcgactggcaaacaacagcgatagcattacgtatcgtgtg
cgcaaaggcgattcgctttcaagcattgctaaacgccacggcgtgaacatcaaagatgtg
atgcgctggaacagcgacactgcgaatctgcaaccaggcgacaagctgacgttgtttgtg
aaaaacaacaacatgccagattcctga
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