Shigella flexneri 2457T (serotype 2a): S0490
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Entry
S0490 CDS
T00128
Symbol
ybdE
Name
(GenBank) putative inner membrane component for iron transport
KO
K07787
copper/silver efflux system protein
Organism
sfx
Shigella flexneri 2457T (serotype 2a)
Pathway
sfx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sfx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
S0490 (ybdE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfx02000
]
S0490 (ybdE)
Transporters [BR:
sfx02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
S0490 (ybdE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
AAP16006
UniProt:
A0A9P2J116
LinkDB
All DBs
Position
496745..499888
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AA seq
1047 aa
AA seq
DB search
MIEWIIRRSVANRFLVLMGALFLSIWGTWTIINTPVDALPDLSDVQVIIKTSYPGQAPQI
VENQVTYPLTTTMLSVPGAKTVRGFSQFGDSYVYVIFEDGTDPYWARSRVLEYLNQVQGK
LPAGVSAELGPDATGVGWIYEYALVDRSGKHDLADLRSLQDWFLKYELKTIPDVAEVASV
GGVVKEYQVVIDPQRLAQYGISLAEVKSALDASNQEAGGSSIELAEAEYMVRASGYLQTL
DDFNHIVLKASENGVPVYLRDVAKVQIGPKMRRGIAELNGEGEVAGGVVILRSGKNAREV
IAAVKDKLETLKSSLPEGVEIVTTYDRSQLIDRAIDNLSGKLLEEFIVVAVVCAPFLWHV
RSALVAIISLPLGLCIAFIVMPFQGLNANIMSLGGIAIAVGAMVDAAIVMIENAHKRLEE
WQHQHPDATLDNKTRWQVITDASVEVGPALFISLLIITLSFIPIFTLEGQEGRLFGPLAF
TKTYAMAGAALLAIVVIPILMGYWIRGKIPPESSNPLNRFLIRVYHPLLLKVLHWPKTTL
LVAALSVLTVLWPLNKVGGEFLPQINEGDLLYMPSTLPGISAAEAASMLQKTDKLIMSVP
EVARVFGKTGKAETATDSAPLEMVETTIQLKPQDQWRPGMTMDKIIEELDNTVRLPGLAN
LWVPPIRNRIDMLSTGIKSPIGIKVSGTVLADIDAMAEQIEEVARTVPGVASALAERLEG
GRYINVEINREKAARYGMTVADVQLFVTSAVGGAMVGETVEGIARYPINLRYPQSWRDSP
QALRQLPILTPMKQQITLADVADVKVSTGPSMLKTENARPTSWIYIDARDRDMVSVVHDL
QKAIAEKVQLKPGTSVAFSGQFELLERANHKLKLMVPMTLMIIFVLLYLAFRRVGEALLI
ISSVPFALVGGIWLLWWMGFHLSVATGTGFIALAGVAAEFGVVMLMYLRHAIEAEPSLNN
PQTFSEQKLDEALYHGAVLRVRPKAMTVAVIIAGLLPILWGTGAGSEVMSRIAAPMIGGM
ITAPLLSLFIIPAAYKLMWLHRHRVRN
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatggattattcgtcgctcggtggcgaaccgttttttggtgctgatgggcgcg
ttgtttctgagcatctggggcacctggaccatcattaatacgccagtggatgcgttgccg
gatctctccgatgtgcaggtgattattaaaaccagctatcccggccaggcaccgcaaatc
gttgaaaatcaggtgacttatccgctaaccaccaccatgttgtcggtgcctggcgcgaag
actgtgcgtggtttctcgcagtttggcgactcttatgtgtatgtcattttcgaagatggc
accgatccgtactgggcgcgttcgcgggtgctggagtacctcaaccaggtacagggtaag
ctgcctgcgggagtcagcgccgagctgggaccagatgccacgggtgttggctggatctat
gaatatgcactggtggatcgcagcggtaagcacgatcttgccgatttacgctcattgcag
gactggtttctcaaatatgagctgaaaaccattcctgacgttgcggaagtggcgtcggta
ggcggtgtggtgaaagagtatcaggtggttatcgatcctcagcgcctggcgcagtatggc
atcagtctcgccgaagtaaaaagcgcgctggatgcttcaaaccaggaagcgggcggttcg
tcaatcgaactggcggaagcagaatatatggtgcgcgccagcggctatctacaaacgctc
gacgactttaatcacatcgttttaaaagccagtgaaaatggcgtgcccgtttatctgcgc
gatgttgcgaaggtccagattggcccgaagatgcgccggggcattgccgaactaaacggc
gaaggcgaagtggcgggcggggtggtgatcctgcgatccggcaaaaacgcccgagaagtg
atcgccgccgtgaaggacaaactggaaacgctgaaaagtagtctgccggaaggcgtggag
atagttacaacatacgaccgcagccagctcattgaccgggccatcgacaacctcagcggc
aagttgctggaagagtttattgtggtggcggtagtctgcgcgccgtttctctggcatgtg
cgctcggcgctggtggcgattatttcgttgccgctggggttgtgtattgcttttattgtc
atgcccttccaggggctgaatgccaatattatgtcgctgggtggcattgcgattgccgtc
ggggcgatggtcgatgccgctatcgtcatgatcgagaatgcgcataaacggctggaagag
tggcagcaccagcatcctgacgccacgctggataataaaacgcgctggcaggtgatcacc
gatgcgtctgttgaagtggggccggcgctgtttatcagtctgctgattatcacgttgtcg
tttatcccgatcttcaccctggaagggcaggaagggcgtctgtttggcccgttggcgttc
accaaaacgtatgcgatggcgggtgcggcgctgctggcgatcgtagtgatccctatcctg
atgggttactggatccgtggcaaaattccgccggaaagcagtaatccgctcaatcgcttt
ttgattcgtgtttatcatccgctgttgctgaaagtactgcactggccgaaaaccacgctg
ctggtggcggcgctttcggtgctgacggttctctggccgctcaataaagttggcggggaa
tttttaccgcagatcaatgaaggcgacttgttgtatatgccatcgacgctgccggggatt
tccgcagcagaggcggcgagtatgctgcaaaaaaccgacaagctaattatgagcgtacct
gaagtggcgcgggtatttggcaaaaccgggaaagcggaaaccgccaccgattctgctccg
ctggagatggtagaaacgaccatccagcttaagccacaggatcagtggcggccaggcatg
acaatggacaaaatcattgaggaactggataacaccgtgcgtctgccggggctggcgaat
ctgtgggtgccgccaattcgtaaccgtatcgatatgctctcaaccggcattaaaagcccc
atcggcattaaagtttccggcactgtgctggcggatatcgacgcgatggctgagcaaatt
gaagaagtggcgcgaacggtgccaggcgtagcttctgcgcttgctgagcggctggaaggt
gggcgctatatcaacgttgagattaaccgtgaaaaagccgcacgttacggtatgacggtg
gcggatgtgcagttgtttgtgacttctgcggtgggcggggcgatggttggcgaaacggtg
gaagggattgcccgttatccaattaatctgcgttatccgcaaagctggcgcgatagtccg
caggcactgcgccagttgccgatcctgacgccgatgaagcagcaaatcaccctggcagac
gtggccgacgttaaagtctctaccggaccgtcgatgctgaaaaccgagaatgcgcgcccg
acgagctggatttatatcgatgcccgcgatcgtgacatggtgtcggtggttcacgatttg
caaaaagcgatagctgaaaaagtgcagttaaaaccgggcaccagcgtggcattctccggg
cagttcgagctactggagcgcgccaaccataagctgaaactcatggtgccgatgacactg
atgatcatcttcgtgctgttgtatctggcattccgtcgggtgggcgaagcgttgctgatt
atcagcagcgtaccgtttgcgctggtgggcggcatctggttactgtggtggatgggcttt
catctttctgtggcgacgggtaccggctttattgcccttgccggggtcgccgccgaattt
ggcgtggtgatgctgatgtatttacgtcacgccatagaggccgagccgtcgttgaataat
ccacaaacattcagcgagcagaagctggatgaggcgttgtatcacggcgcggtcctgcgc
gtgcgcccgaaagcgatgacggtggcggtgattatcgccggtctgctgccgattctgtgg
ggaacgggggctggttcagaggtgatgagccggattgccgcaccgatgattggcggcatg
atcaccgcacctttgctgtcgctgtttattatcccggcggcgtataagctgatgtggctg
caccgacatcgggtacggaattaa
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