Shigella flexneri 2457T (serotype 2a): S1197
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Entry
S1197 CDS
T00128
Symbol
ycfS
Name
(GenBank) hypothetical protein
KO
K19236
L,D-transpeptidase YcfS
Organism
sfx
Shigella flexneri 2457T (serotype 2a)
Pathway
sfx01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sfx00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
S1197 (ycfS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfx01002
]
S1197 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sfx01011
]
S1197 (ycfS)
Peptidases and inhibitors [BR:
sfx01002
]
Cysteine peptidases
Family C82
S1197 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
sfx01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
S1197 (ycfS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
AAP16623
UniProt:
A0A3T6IX99
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All DBs
Position
complement(1160047..1161009)
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AA seq
320 aa
AA seq
DB search
MMIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPASSRLVGENKFHVVENDGGSLEAIA
KKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGK
NSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGP
DNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNI
INTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVM
DVRSGMPVDVRRHQVSPQTL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtgatgatcaaaacgcgtttttctcgctggctaacgttttttacgttcgccgctgccgtg
gcgctggcgctaccggcaaaagccaacacctggccgctgccgccagcgagcagtcgtctg
gttggcgaaaacaaatttcatgtggtggaaaatgacggtggttctctggaagccatcgcc
aaaaaatataacgtcggctttctcgctctgttacaagctaaccccggcgttgatccttac
gtaccgcgcgcgggcagcgtgttaacgatcccgttgcaaaccctacttccagacgcgccg
cgcgaaggcattgtgatcaacattgcggagctgcgtctctattactacccgccgggtaaa
aattcggtaaccgtgtatccaataggtattggtcagttaggtggtgacacgctgacaccg
acaatggtgaccaccgtttcagacaaacgtgcaaacccaacctggacgccaacggcaaac
atccgcgcccgttataaagcacagggaattgagttgcctgcggtagtgccggctggaccg
gataacccaatgggccatcatgcgattcgtctggcggcctatggcggcgtttatttgctt
cacggtacgaacgccgatttcggcattggcatgcgggtaagttctggctgtattcgtctg
cgggatgacgatatcaaaacactctttagccaggtcaccccaggcaccaaagtgaatatc
atcaacactccgataaaagtctctgccgaaccaaacggtgcgcgtctggttgaagtacat
cagccgctgtcagagaagattgatgacgatccgcagctgctgccaattacgctgaatagc
gcaatgcaatcatttaaagatgcagcacaaactgacgctgaagtgatgcaacatgtgatg
gatgtccgttccgggatgccggtggatgtccgccgtcatcaagtgagcccacaaactctg
taa
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