Shigella flexneri 2457T (serotype 2a): S1237
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Entry
S1237 CDS
T00128
Symbol
ymfC
Name
(GenBank) hypothetical protein
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
sfx
Shigella flexneri 2457T (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sfx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfx03009
]
S1237 (ymfC)
Enzymes [BR:
sfx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
S1237 (ymfC)
Ribosome biogenesis [BR:
sfx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
S1237 (ymfC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF8729
Cyc-maltodext_C
Motif
Other DBs
NCBI-ProteinID:
AAP16660
UniProt:
Q83LF6
LinkDB
All DBs
Position
complement(1198375..1198998)
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AA seq
207 aa
AA seq
DB search
MQKTSFRNHQVKRFSSQRSTRRKHENQPTRVILFNKPYDVLPQFTDETGRKTLKEFIPVQ
GVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGIPTQDALEALRNGVT
LNDGPTLPAGAELVDEPAWLWPRNPPIRERKSIPTSWLKITLYEGRNRQVRRMTAHVGFP
TLRLIRYAMGDYSLDNLANGEWREVTD
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaacttcttttagaaatcaccaggttaagcgattcagctcgcaacgttctacc
aggcgtaaacatgaaaaccagcccacgcgtgtgatcctcttcaataaaccctacgatgtt
cttccgcagttcaccgatgaaaccggacgcaaaacattaaaagaattcatcccggttcag
ggcgtttatgcagcaggtcgccttgaccgcgatagcgaagggttgctggtgctgaccaat
aacggcgcgttgcaggcgcgtttaacccagccgggtaaacgcaccggaaaaatctattat
gtgcaggtggaaggtattcccacacaagacgcacttgaagccttgcgcaatggcgtaacc
ttaaatgatggccctaccctgcccgcaggcgcggagctggttgacgaacccgcgtggtta
tggccgcggaatccaccaattcgtgaacgcaaaagtattcccaccagctggctgaagatc
accttatatgaaggacgtaatcgccaggtgcgccgcatgaccgcccatgttggtttcccc
acgctgcgactgattcgctatgcgatgggagattactctttggataatcttgccaatggc
gaatggcgagaagtgacagattaa
DBGET
integrated database retrieval system
