Shigella flexneri 2457T (serotype 2a): S1447
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Entry
S1447 CDS
T00128
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
sfx
Shigella flexneri 2457T (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sfx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfx03009
]
S1447 (dbpA)
Enzymes [BR:
sfx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
S1447 (dbpA)
Ribosome biogenesis [BR:
sfx03009
]
Prokaryotic type
rRNA helicases
S1447 (dbpA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AAP16844
UniProt:
A0A9P2J1F7
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All DBs
Position
1410534..1411901
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AA seq
455 aa
AA seq
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MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLG
LLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQ
HAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQT
LLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQ
PSSCVVFCNTKKDCQAVCDALNEVEQSALSLHGDLEQRDQTLVRFANGSARVLVATDVAA
RGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDMLQI
KLNWQTPPANSSIVTLEAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKIAVHP
AHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgctttttctaccctgaatgttttgcctcccgcccaactcacgaaccttaatgag
ttgggttatttaaccatgacgccggtgcaggccgccgcgcttccggcgatccttgccgga
aaagatgttcgcgtgcaggcgaaaaccggcagcggcaaaacggcggcttttggcctcggc
ttgttacagcaaattgatgcgtcgctatttcaaacccaggctttagtgctgtgtcctacg
cgtgaactggcggatcaggtggcaggtgaattgcgtcggctggcgcgttttctgccaaat
accaaaattttgacgttgtgcggtggtcaaccgttcggtatgcagcgtgattcgctgcaa
catgcgccgcatattatcgtggcaacgccgggtcgtttgctggatcacttgcaaaaaggc
acggtatcactggatgcgctgaatactttggtgatggatgaggccgaccgcatgctggat
atgggatttagcgatgccattgatgatgtcatccgttttgcgcctgcatctcgacagacg
cttctgttttcggcaacctggccggaagccatcgccgcaatcagcggacgagtgcaacgc
gatcctttggcgattgaaattgactcaacagatgctttgccacccattgaacaacaattt
tatgagacatccagtaaaggcaaaattcctctgttgcaacggttattaagcttgcatcag
ccatcctcttgtgtggtgttttgcaataccaaaaaagattgccaggctgtctgcgacgcg
ctgaatgaagtagagcaaagtgcattgtcgttacacggcgatctggagcaacgcgatcag
accctggtacgttttgctaacggtagcgcccgtgtactggttgcgactgatgttgctgcg
cgtggtctggatattaaatcgcttgagctggtggtgaactttgagctggcgtgggaccct
gaagttcatgtacatcgcatcggtcgtacagctcgtgcaggaaatagcggtctggcgatc
agtttctgtgctccggaagaagcacagcgggccaatatcatttctgacatgttgcagata
aaacttaactggcaaacgccgccagctaatagttccattgtgacgctggaagcagaaatg
gcaacgttgtgtatcgatggcgggaaaaaagccaaaatgcgcccgggtgatgtattaggt
gcactgacaggagatatcgggcttgatggcgcagatattggcaaaatcgccgtgcatccg
gcgcatgtctatgtcgcggtccgtcaggctgttgctcataaagcatggaaacagttacag
ggcgggaagattaaaggaaaaacgtgccgggtgcggttattaaaataa
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