Shigella flexneri 2457T (serotype 2a): S1448
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Entry
S1448 CDS
T00128
Symbol
ydaO
Name
(GenBank) hypothetical protein
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
sfx
Shigella flexneri 2457T (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sfx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfx03016
]
S1448 (ydaO)
Transfer RNA biogenesis [BR:
sfx03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
S1448 (ydaO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP_bind_3
MurL_N
ThiI_fer
Motif
Other DBs
NCBI-ProteinID:
AAP16845
UniProt:
Q83KS7
LinkDB
All DBs
Position
complement(1412030..1412965)
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AA seq
311 aa
AA seq
DB search
MSQNQEISKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILR
NLQQSAPINFSLVAVNLDQKQPGFPEHVLPEYLEKLGVEYKIVEENTYGIVKEKIPEGKT
TCSLCSRLRRGILYRTATELGTTKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDG
KHIVIRPLAYCREKDIQRFADAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIE
TMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVNGGDLAFDREEIPLQPAGWQPEEDENQL
DELRLNVVEVK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaattacaaaaa
cgtctgcgtcgtaacgtgggcgaagccattgctgacttcaatatgattgaagaaggcgat
cgcatcatggtttgcctctccgggggtaaagacagctataccatgctggagattctgcgc
aatttgcagcaaagcgcgccaatcaatttttcgctggtggctgttaacctcgatcaaaag
caaccgggcttcccggaacacgttctgcccgagtatcttgaaaagctgggcgttgagtac
aagattgttgaagagaacacttacggtatcgtgaaagagaagattccagagggcaaaacc
acttgctcactgtgttctcggctacgtcgcggtatcctttatcgcaccgcaacggaactg
gggacgacgaagatcgcgttgggtcaccatcgtgacgatatcctgcaaacgttgttctta
aatatgttctacggcggcaagatgaaaggtatgcctccgaaactgatgagcgatgatggc
aaacatatcgttattcgtccactggcctactgccgcgagaaagatattcagcgatttgcc
gatgcaaaagcgttcccgattattccgtgcaacctgtgcggttcacagcctaacctgcaa
cgtcaggtgattgctgacatgttgcgtgactgggataaacgttatccagggcgtatcgag
acgatgttcagcgcgatgcagaatgtggtgccgtcgcatctgtgcgataccaacctgttc
gatttcaaaggcattacccacggttctgaagtggttaacgggggtgatctggcgtttgat
cgcgaagagatcccactacaaccggcgggctggcagccagaagaagatgaaaatcagttg
gatgagttacggctgaatgtggttgaagtgaaataa
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