Shigella flexneri 2457T (serotype 2a): S2221
Help
Entry
S2221 CDS
T00128
Symbol
rfbF
Name
(GenBank) dTDP-rhamnosyl transferase
KO
K12990
rhamnosyltransferase [EC:2.4.1.-]
Organism
sfx
Shigella flexneri 2457T (serotype 2a)
Pathway
sfx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
S2221 (rfbF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sfx01005
]
S2221 (rfbF)
Lipopolysaccharide biosynthesis proteins [BR:
sfx01005
]
O-antigen repeat unit
S2221 (rfbF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_trans_2_3
Motif
Other DBs
NCBI-ProteinID:
AAP17467
UniProt:
P37782
LinkDB
All DBs
Position
complement(2095893..2096783)
Genome browser
AA seq
296 aa
AA seq
DB search
MNSNIYAVIVTYNPELKNLNALITELKEQNCYVVVVDNRTNFTLKDKLADIEKVHLICLG
RNEGIAKAQNIGIRYSLEKGAEKIIFFDQDSRIRNEFIKKLSCYMDNENAKIAGPVFIDR
DKSHYYPICNIKKNGLREKIHVTEGQTPFKSSVTISSGTMVSKEVFEIVGMMDEELFIDY
VDTEWCLRCLNYGILVHIIPDIEMVHAIGDKSVKICGINIPIHSPVRRYYRVRNAFLLLR
KNHVPLLLSIREVVFSLIHTTLIIATQKNKIEYMKKHILATLDGIRGITGGGRYNA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtaatatttacgctgtcattgtgacatataatcccgaacttaaaaatctgaat
gcactgatcactgaactaaaggagcaaaattgttacgttgtagtagtcgataataggact
aatttcaccttgaaagataaattagcagacattgaaaaagttcatttaatttgtcttggt
aggaatgaaggtatagcaaaagcacaaaatattgggattcgatattctcttgaaaaaggg
gcagagaagataattttttttgatcaagatagccgtattcgcaatgagtttatcaaaaaa
ctttcctgctatatggataatgaaaatgcaaaaatagctggcccagtttttattgataga
gataagtcacattattatcctatttgtaatatcaaaaaaaatggtcttcgagagaaaatt
catgtcactgaaggacagacaccgtttaaaagttcagtaacaatctcatccggaaccatg
gtttcaaaagaagtttttgagattgttggaatgatggatgaggaactttttattgattat
gtcgatacagaatggtgtcttagatgcttaaactatggcatattagttcatatcattcct
gatatagaaatggttcatgctattggggataagtcagtaaaaatctgtgggattaacata
ccaattcactcgccagtacgtcgttattatcgagtaagaaatgcatttcttttgcttaga
aaaaatcatgtgcctcttttactctctattagggaagttgttttttctttaattcatacg
actttaattatcgcaactcaaaaaaataaaattgaatatatgaaaaaacatattttggct
acgctggatggaataagaggaattactgggggcggtcgttataatgcatag
DBGET
integrated database retrieval system
