Shigella flexneri 2457T (serotype 2a): S2223
Help
Entry
S2223 CDS
T00128
Symbol
rfbC
Name
(GenBank) dTDP-6-deoxy-L-mannose-dehydrogenase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sfx
Shigella flexneri 2457T (serotype 2a)
Pathway
sfx00521
Streptomycin biosynthesis
sfx00523
Polyketide sugar unit biosynthesis
sfx00541
Biosynthesis of various nucleotide sugars
sfx01100
Metabolic pathways
sfx01110
Biosynthesis of secondary metabolites
sfx01250
Biosynthesis of nucleotide sugars
Module
sfx_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sfx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
S2223 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
S2223 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
S2223 (rfbC)
Enzymes [BR:
sfx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
S2223 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AAP17469
UniProt:
P37780
LinkDB
All DBs
Position
complement(2098085..2098630)
Genome browser
AA seq
181 aa
AA seq
DB search
MNVIKTEIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKSTKGVLRG
LHYQLEPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHG
FCVLSDEAEFVYKTNNFYSKMQERGILWSDKSINIEWPVQNPLLSDKDINGQKFVDADYF
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaattaaaactgaaattcctgatgtgctaatttttgaaccaaaagtatttggt
gatgagcggggcttttttatggaaagcttcaatcagaaagttttcgaagaggctgtagga
cgaaaggttgagtttgttcaggataaccattctaaatcaactaagggtgtgttacgcgga
ctgcactatcagctggaaccttatgctcaaggaaaactggtacgctgtgttgtcggtgaa
gtttttgacgtagctgttgatattcggaaatcatcaccaacatttggcaagtgggttggt
gtaaatttgtcggcggagaataagcgtcaattatggataccggaaggattcgctcatggg
ttttgcgttcttagtgatgaagcagaatttgtctacaaaacaaataatttctattcaaaa
atgcaagagcgtgggattttatggagcgacaaaagtataaatatagaatggccggttcaa
aatccattgctttctgataaagatattaatggtcaaaaatttgtagatgctgattatttt
atatga
DBGET
integrated database retrieval system
