Shigella flexneri 2457T (serotype 2a): S2258
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Entry
S2258 CDS
T00128
Symbol
alkA
Name
(GenBank) 3-methyl-adenine DNA glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sfx
Shigella flexneri 2457T (serotype 2a)
Pathway
sfx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
S2258 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfx03400
]
S2258 (alkA)
Enzymes [BR:
sfx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
S2258 (alkA)
DNA repair and recombination proteins [BR:
sfx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
S2258 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AAP17497
UniProt:
A0A658Y4B5
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All DBs
Position
complement(2136535..2137383)
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AA seq
282 aa
AA seq
DB search
MYILNWQPPYDWSWMLGFLAARAVSGVETVADSYYARSLAVGEYRGVVTAIPDIARHTLH
INLSAGLEPVAAECLAKMSRLLDLQCNPQIVNGALGKLGAARPGLRLPGSVDAFEQGVRA
ILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMPLKRAE
ALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYL
IKQRFLGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcctgaactggcagccgccgtatgactggtcgtggatgttgggatttctcgcc
gcccgtgcggtgagtggtgtggaaacggtcgcggacagttattatgcccgtagtctggca
gtgggcgaatatcgcggcgtggtgactgctattccggatatagcccgccatactctgcac
ataaatttaagtgcaggtttagaacccgttgccgctgagtgtctggcgaaaatgagccgc
ctgcttgatctgcaatgtaacccgcagattgttaacggtgcgttgggcaagttaggcgcg
gcgcggcccggattgcgtttacccggcagtgttgatgcttttgagcagggcgtgcgggcg
attttaggccaactggtgagcgtggcgatggcggcaaaattgaccgccagagtggcacag
ctttatggcgaacggctggatgattttccggagtatatctgcttccccacgcctcagcgg
ctggcagcagccgacccgcaggcattaaaagcgttaggtatgccgttgaaacgggcagag
gcgctgattcatctggcaaatgcggcgctggagggcaccttaccaatgacaataccgggc
gatgtggagcaggcgatgaaaacgctgcaaacttttccgggtatcgggcgctggacggcg
aattatttcgccttgcgcggctggcaggcgaaagatgtttttctgccggatgattatctg
attaaacagcgatttctggggatgacaccggcacaaatccgccgttatgccgagcgctgg
aagccctggcgttcttatgcgctgttgcatatctggtatacggaaggctggcaaccagac
gaagcatga
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