Shigella flexneri 2457T (serotype 2a): S2275
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Entry
S2275 CDS
T00128
Symbol
gatR
Name
(GenBank) galactitol utilization operon repressor
KO
K02436
DeoR family transcriptional regulator, galactitol utilization operon repressor
Organism
sfx
Shigella flexneri 2457T (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sfx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfx03000
]
S2275 (gatR)
Transcription factors [BR:
sfx03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
S2275 (gatR)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
GntR
HTH_11
CoA_trans
HTH_PafC
CggR_N
Rib_5-P_isom_A
HTH_5
FeoC
SelB_WH_2nd_bact
MarR
DsrD
Motif
Other DBs
NCBI-ProteinID:
AAP17509
UniProt:
A0A0H2VXZ8
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Position
complement(2158719..2159498)
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AA seq
259 aa
AA seq
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MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAK
IMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMT
AKNITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGA
DGIDAVNGITTFNEGYSISEAMVTAANKVIAVLDSSKFNRRGFNQVLPIEKIDIIVTDDA
VSEVDKLALQKTRVKLITV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgaattcattcgagcgaaggaataagatcatccaattagtgaatgaacaggga
accgtgcttgttcaggatctggcgggagtatttgctgcctcggaagcgacaatccgtgcc
gatttgcgctttctcgaacaaaaaggcgtggttacgcgctttcatggcggtgcggcgaaa
ataatgtccggtaatagtgaaaccgagacccaggaagtcgggtttaaagagcgatttcag
ctcgccagcgcgccaaaaaacagaatagcgcaggcggcagtcaaaatgatccatgaaggg
atgaccgttattctcgacagcggaagtaccacaatgcttatcgccgaaggattaatgacc
gctaaaaatatcacggtgattaccaacagtctcccggcagcgtttgccctttccgaaaat
aaagacattactctggtcgtctgtggtggcacggtccgccataaaacgcgctcgatgcat
ggttccattgccgagcgttcattgcaggatattaatgccgatttaatgtttgtcggtgct
gatggtattgatgcggttaatggtattacgacctttaatgaaggttattcgattagcgag
gcgatggtcaccgccgcaaataaagtgattgccgttctcgattcatcgaaatttaatcgt
cgcggttttaatcaggtactgccaatcgaaaaaattgacattattgttaccgatgatgct
gtgtcagaggtggataaattggcattgcagaagacacgggtaaaattaattacggtgtag
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