Shigella flexneri 2457T (serotype 2a): S2777
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Entry
S2777 CDS
T00128
Symbol
yfhD
Name
(GenBank) putative periplasmic binding transport protein
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
sfx
Shigella flexneri 2457T (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sfx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sfx01011
]
S2777 (yfhD)
Enzymes [BR:
sfx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
S2777 (yfhD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sfx01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
S2777 (yfhD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
AAP17926
UniProt:
P0AGC6
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All DBs
Position
2674398..2675816
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AA seq
472 aa
AA seq
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MSTIHTPLTYNEINGKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNADLLA
AGLVYNSERVKNYQPGPTYYSVSQQLVYKVGQYRPRTLGNLTAEQLTVAPGHVVVNDLQT
LKETKFPELSWKVDDKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELAVALDITDE
QPVTWFSPLDGDNTLSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVDTRTFLRAVDA
VLPQLKPLFEKYAEEIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLTKNTAQSLGITDR
TDAEQSISGGVRYLQDMMSKVPESVPENERIWFALAAYNMGYAHMLDARALTAKTKGNPD
SWADVKQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQISLVGYLQEKEKQATEAA
MQLAQDYPAVSPTELGKEKFPFLSFLSQSSSNYLTHSPSLLFSRKGSEEKQN
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccattcatactcccctgacttataacgaaatcaacgggaaaccttttggcctg
gattacgaactggcgaaacagtttgccgattacctcggcgtaaaactgaaagtgaccgtg
cggcagaatatcagccagctgtttgacgaccttgataatggtaacgccgacctgctggcg
gcaggactggtctataacagtgagcgggtaaaaaattatcagcctggccctacctattat
tccgtgtcacaacaactggtttataaagtgggtcagtatcgcccacgtacgctgggcaac
ctgacggcggagcaactcaccgttgcaccgggtcatgtggtagttaacgatctccagacc
ctgaaagaaacaaaattcccggaattaagctggaaggtagacgacaaaaaaggctctgcg
gaattaatggaagatgtcatcgaaggaaaactcgattacaccattgctgattctgtcgcc
atcagcctgtttcagcgcgttcacccggagctcgccgtagcgctcgatatcaccgatgaa
caaccggtgacttggtttagcccgttagatggcgataataccctttccgccgccctgctc
gacttcttcaacgaaatgaatgaagacggtacgctggcacgcattgaagagaaatacctg
gggcatggcgatgattttgattacgtcgatacgcgcacatttttacgcgccgtcgatgcg
gtactgccgcagttaaagcccctgtttgagaaatacgccgaagaaattgactggcgtttg
ctggccgctattgcttatcaggaatcgcactgggatgcacaggccacttcaccgacgggt
gtgcgcggcatgatgatgttaaccaaaaataccgcgcaaagcctcggcattacggatcgt
accgatgccgaacagagcatcagcggtggcgtgcgttatttgcaggatatgatgagtaaa
gtgccggaaagtgtgccggagaacgaacggatctggtttgccctcgctgcgtacaatatg
ggctatgcgcatatgctggatgcccgcgccctgacggcaaaaaccaaagggaatcctgac
agttgggctgacgtaaaacagcgtctgcctttacttagccagaaaccctattacagcaag
ctgacttacggctacgctcgtgggcatgaagcctacgcttatgtcgaaaatattcgtaag
tatcagattagcctggtgggttatctgcaagagaaagagaagcaggctacagaagcggcg
atgcaactggcgcaggattatccggcggtatcgcctacggagttgggcaaagagaaattt
ccttttctctcgtttctttcccagtcgtcatcaaactatttgacccattctccctctctg
ctgttttccaggaaagggagtgaagagaaacaaaattaa
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