Shigella flexneri 2457T (serotype 2a): S3456
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Entry
S3456 CDS
T00128
Symbol
yrbI
Name
(GenBank) hypothetical protein
KO
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
sfx
Shigella flexneri 2457T (serotype 2a)
Pathway
sfx00541
Biosynthesis of various nucleotide sugars
sfx01100
Metabolic pathways
sfx01250
Biosynthesis of nucleotide sugars
Module
sfx_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
sfx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
S3456 (yrbI)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sfx01005
]
S3456 (yrbI)
Enzymes [BR:
sfx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
S3456 (yrbI)
Lipopolysaccharide biosynthesis proteins [BR:
sfx01005
]
Lipid A
S3456 (yrbI)
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Paralog
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Motif
Pfam:
Hydrolase_3
Hydrolase
HAD_2
S6PP
Motif
Other DBs
NCBI-ProteinID:
AAP18518
UniProt:
P67654
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All DBs
Position
3325559..3326125
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AA seq
188 aa
AA seq
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MSKAGASLATCYGPVSADVMAKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGY
GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNKLIAFSDLLEKLAIAPENV
AYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCDLLLLAQGKL
DEAKGQSI
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagcaggtgcgtcgcttgcgacctgttacggccctgtcagcgccgacgttatg
gcaaaagcagagaacattcgtctgctgatcctcgacgttgatggcgtactgtcagatggc
ctgatttatatgggcaataacggcgaagagctgaaagcgttcaatgttcgtgacggttat
ggcattcgttgtgcgctcacctctgatattgaagtcgctatcattaccgggcgaaaggct
aaactggtagaagatcgttgtgccacattggggatcactcacttgtatcaggggcagtca
aacaaactgatcgcctttagcgatttgctggaaaaattggcgattgccccggaaaatgtg
gcttatgttggcgatgatctcatcgactggccggtaatggaaaaagtgggtttaagcgtc
gccgtggccgatgcgcatccactgttgatcccgcgcgccgattacgtgacgcgcattgct
ggcggtcgtggcgcagtgcgcgaagtttgcgacttattactcctggcgcagggcaaactg
gatgaagccaaagggcaatcgatatga
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