Shigella flexneri 2457T (serotype 2a): S3479
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Entry
S3479 CDS
T00128
Symbol
yhcK
Name
(GenBank) putative FADA-type transcriptional regulator
KO
K22104
GntR family transcriptional regulator, sialic acid-inducible nan operon repressor
Organism
sfx
Shigella flexneri 2457T (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sfx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfx03000
]
S3479 (yhcK)
Transcription factors [BR:
sfx03000
]
Prokaryotic type
Helix-turn-helix
GntR family
S3479 (yhcK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
LexA_DNA_bind
FadR_C
TrmB
HTH_Crp_2
Fe_dep_repress
HTH_36
DUF6432
Motif
Other DBs
NCBI-ProteinID:
AAP18539
UniProt:
P0A8W1
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All DBs
Position
complement(3350877..3351659)
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AA seq
260 aa
AA seq
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MNAFDSQTEDSSPAIGRNLRSRPLARKKLSEMVEEELEQMIRRREFGEGEQLPSERELMA
FFNVGRPSVREALAALKRKGLVQINNGERARVSRPSADTIIGELSGMAKDFLSHPGGIAH
FEQLRLFFESSLVRYAAEHATDEQIDLLAKALEINSQSLDNNAAFIRSDVDFHRVLAEIP
GNPIFMAIHVALLDWLIAARPTVTDQALHEHNNVSYQQHIAIVDAIRRHDPDEADRALQS
HLNSVSATWHAFGQTTNKKK
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcatttgattcgcaaaccgaagattcttcacctgcaattggtcgcaacttgcgt
agccgcccgctggcgcgtaaaaaactctccgaaatggtggaagaagagctggaacagatg
atccgccgtcgtgaatttggcgaaggtgaacaattaccgtctgaacgcgaactgatggcg
ttctttaacgtcgggcgtccttctgtgcgtgaagcgctggcagcgttaaaacgcaaaggt
ctggtgcaaataaacaacggcgaacgcgctcgtgtctctcgaccttctgcggacactatc
atcggcgagctttccggcatggcgaaagatttcctttctcatcctggtgggattgcccat
ttcgaacaattacgtctgttctttgaatccagcctggtgcgctatgcggctgaacacgcc
accgatgagcaaatcgatttgctggcaaaagcactggaaatcaacagtcagtcgctggat
aacaacgcggcattcattcgttcagacgttgatttccaccgcgtgctggcggagatcccc
ggtaacccaatcttcatggcgatccacgttgccctgctcgactggcttattgccgcacgc
ccaacggttaccgatcaggcactgcacgaacataacaacgttagttatcaacagcatatt
gcgatcgttgatgcgatccgccgtcatgatcctgacgaagccgatcgtgcgttgcaatcg
catctcaacagcgtctctgctacctggcacgctttcggtcagaccaccaacaaaaagaaa
taa
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