Shigella flexneri 2457T (serotype 2a): S3502
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Entry
S3502 CDS
T00128
Symbol
cafA
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
sfx
Shigella flexneri 2457T (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sfx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfx03019
]
S3502 (cafA)
03009 Ribosome biogenesis [BR:
sfx03009
]
S3502 (cafA)
Messenger RNA biogenesis [BR:
sfx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
S3502 (cafA)
Ribosome biogenesis [BR:
sfx03009
]
Prokaryotic type
rRNA processing factors
S3502 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AAP18560
UniProt:
P0A9J3
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All DBs
Position
complement(3373980..3375449)
Genome browser
AA seq
489 aa
AA seq
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MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDI
GLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQDLMVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAEYCDEQGGFIIRTAAEGVGEA
ELASDAAYLKRVWTKVMERKKRPQTRYQLYGELALAQRVLRDFADAELDRIRVDSRLTYE
ALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEIQRALERKVELKSGGYLIIDQTEAM
TTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRV
LHSLEQALSKDRVKTSVNGFSALGLVEMTRKRTRESIEHVLCNECPTCHGRGTVKTVETV
CYEIMREIVRVHHAYDSDRFLVYASPAVAEALKGEESHSLAEVEIFVGKQVKVQIEPLYN
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgaattgttagtaaacgtaacgccttcggaaacgcgagtggcgtatattgat
ggcggtattctgcaggaaattcatattgaacgtgaggcgcgacgcggaatagtaggcaat
atctacaagggtcgtgtaagtcgtgtacttccgggtatgcaggcggcttttgtagatatt
gggctggataaagccgcgtttcttcatgcatccgacatcatgccgcataccgaatgtgtg
gcgggtgaagaacaaaagcaattcacggtgcgcgacatctcggaactggttcgtcagggg
caagatctgatggtgcaggtggtgaaagatccgcttggcactaaaggtgcgcgcctgacc
accgatatcacgctgccttctcgctatctggtatttatgccaggggcttctcacgttggg
gtttcccaacgaattgaaagcgaatcagaacgtgaacgtctgaaaaaagtggtcgcagag
tattgcgacgagcagggcgggtttatcatccgcaccgcagcggaaggggttggcgaggct
gaactggcctccgatgccgcttatctgaaacgcgtctggaccaaagttatggagcgtaaa
aagcgcccgcagacccgttatcagctgtacggcgaactggcgctggcgcagcgtgttctg
cgtgattttgccgacgccgaactggaccgcattcgcgttgactcacgcctgacttacgaa
gcattgctggagtttacctcggagtacattcccgagatgaccagcaagctggagcattac
accggacgccagccgattttcgatctctttgatgtcgaaaacgaaatccagcgagcgttg
gaacgcaaagtagaactgaaatccggtggttatctgattatcgaccagaccgaagcgatg
accaccgtggacatcaataccggagcgtttgtcggtcatcgcaatctggacgacactatt
ttcaataccaatattgaagcgacgcaggctatcgctcgccagttacggttgcgtaatctg
ggcgggattatcattattgatttcatcgatatgaataatgaagatcaccgccgccgcgtg
ctgcattcgctggagcaggcgttgagcaaagaccgggtgaaaaccagcgttaatggtttt
tcggcgctggggctggtggagatgacgcgtaaacgcacccgcgaaagcattgagcacgta
ctgtgtaacgaatgcccaacctgccacggtcgcggaacggtgaaaaccgtggaaacggta
tgctatgaaatcatgcgcgagattgttcgtgtccaccatgcttacgactccgaccgtttc
ctggtctatgcttctccggcagtagccgaagccttgaaaggcgaagagtcacactcgctg
gcggaagtggaaattttcgttggcaaacaggttaaagtacaaattgaaccgctctataac
caggagcagtttgacgtcgtaatgatgtaa
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