KEGG   Shigella flexneri 2457T (serotype 2a): S3906
Entry
S3906             CDS       T00128                                 
Symbol
rhlB
Name
(GenBank) putative ATP-dependent RNA helicase
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
sfx  Shigella flexneri 2457T (serotype 2a)
Pathway
sfx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sfx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    S3906 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sfx03019]
    S3906 (rhlB)
Enzymes [BR:sfx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     S3906 (rhlB)
Messenger RNA biogenesis [BR:sfx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     S3906 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C CCDC138_C AAA_22
Other DBs
NCBI-ProteinID: AAP18907
UniProt: P0A8K0
LinkDB
Position
3799099..3800364
AA seq 421 aa
MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcatccgaaggtt
gtagaagcccttgaaaaaaaagggtttcataactgtacgcccattcaggcactggccctt
ccgctgacgctggcgggtcgtgacgtagccgggcaggcgcaaaccggtaccgggaaaacg
atggcgtttcttacgtcaacgtttcattatcttctctctcatcctgcgattgccgatcgc
aaggtgaatcaaccgcgtgccttaattatggcaccgacgcgtgaacttgccgtgcagatc
cacgccgacgcggaaccgctggcggaagctaccggcctgaagctgggcctggcttacggt
ggtgatggctatgacaaacagctgaaagtgctggaaagcggcgttgacattctgattggc
accacgggtcgtttaattgactacgccaagcagaaccacattaacctcggtgccattcag
gtagtggtactggacgaagccgatcgcatgtacgatctaggctttattaaagatatccgc
tggctgttccgccgtatgccgcctgcaaatcagcgcctcaacatgctgttctccgccacg
ctttcgtaccgggtacgtgaactggcgttcgagcagatgaacaatgccgaatatattgaa
gtggaaccggaacagaaaacgggccaccgtattaaagaagagcttttctacccttctaac
gaagaaaaaatgcgtttgctgcaaacgctgatcgaagaagagtggccagacagagcgatt
attttcgccaataccaaacaccgttgtgaagagatctggggccacctggcggcagatggt
catcgtgtcggtttgttgacaggcgatgtcgcgcagaaaaaacgtctgcgtattcttgat
gaatttacccgtggcgatctggatattctggttgccaccgacgttgccgcgcgtggtttg
catattccggcagtgacgcacgtctttaactacgatttacccgatgactgtgaagattac
gttcaccgtattggtcgtacaggtcgcgcaggcgcaagcggtcactctatcagcctggcg
tgtgaagagtatgcattgaatttgcctgctattgagacctatattggtcactcaattccg
gtaagcaaatacaatccggacgcattgatgaccgatctgccaaaaccgctgcgcctcacg
cgcccgcgcacaggcaatggtccgcgtcgtactggcgctccgcgtaatcgtcgtcgttca
ggttaa

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