Shigella flexneri 2457T (serotype 2a): S4012
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Entry
S4012 CDS
T00128
Symbol
yidC
Name
(GenBank) 60 KD inner-membrane protein
KO
K03217
YidC/Oxa1 family membrane protein insertase
Organism
sfx
Shigella flexneri 2457T (serotype 2a)
Pathway
sfx02024
Quorum sensing
sfx03060
Protein export
sfx03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sfx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
S4012 (yidC)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
S4012 (yidC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
S4012 (yidC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sfx03029
]
S4012 (yidC)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sfx02044
]
S4012 (yidC)
Mitochondrial biogenesis [BR:
sfx03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
S4012 (yidC)
Secretion system [BR:
sfx02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
S4012 (yidC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YidC_periplas
60KD_IMP
Motif
Other DBs
NCBI-ProteinID:
AAP18995
UniProt:
P59783
LinkDB
All DBs
Position
3906912..3908558
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AA seq
548 aa
AA seq
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MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKL
ISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSPQFIYQAQSGLTGRDGP
DNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNV
QNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIAD
NENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIVAIGYKSQPVLVQPGQT
GAMNSTLWVGPEIQDKMAAVAPHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSIII
ITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDKQRISQEMMALYKAEKVNPL
GGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYYILPILMGVTMLFIQK
MSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGL
HSREKKKS
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggattcgcaacgcaatcttttagtcatcgctttgctgttcgtgtctttcatgatctgg
caagcctgggagcaggataaaaacccgcaacctcaggcccaacagaccacgcagacaacg
accaccgcagcgggtagcgccgccgaccagggcgtaccggccagtggccaggggaaactg
atctcggttaagaccgacgtgcttgatctgaccatcaacacccgtggtggtgatgttgag
caagctctgctgcctgcttacccgaaagagctgaactctacccagccgttccagctgttg
gaaacttcaccgcagtttatttatcaggcacagagcggtctgaccggtcgtgatggcccg
gataacccggctaacggcccgcgtccgctgtataacgttgaaaaagacgcttatgtgctg
gctgaaggtcaaaacgaactgcaggtgccgatgacgtataccgacgcggcaggcaacacg
tttaccaaaacgtttgtcctgaaacgtggtgattacgctgtcaacgtcaactacaacgtg
cagaacgctggcgagaaaccgctggaaatctcctcgtttggtcagttgaagcaatccatc
actctgccaccgcatctcgataccggaagcagcaacttcgcactgcacaccttccgtggc
gcggcgtactccacgcctgacgagaagtatgagaaatacaagttcgataccattgccgat
aacgaaaacctgaacatctcttcgaaaggtggttgggtggcgatgctgcaacagtatttc
gcgacggcgtggatcccgcataacgacggtaccaacaacttctataccgctaatctgggt
aacggcatcgtcgctatcggctataaatctcagccggtactggttcagcctggtcagact
ggcgcgatgaacagcaccctgtgggttggcccggaaatccaggacaaaatggcagctgtt
gctccgcacctggatctgaccgttgattacggttggttgtggttcatctctcagccgctg
ttcaaactgctgaaatggatccatagctttgtgggtaactggggcttctccattatcatc
atcacctttatcgttcgtggcatcatgtacccgctgaccaaagcgcagtacacctccatg
gcgaagatgcgtatgctgcagccgaagattcaggcaatgcgtgagcgtctgggcgatgac
aaacagcgtatcagtcaggaaatgatggcgctgtacaaagctgagaaggttaacccgctg
ggcggctgcttcccgctgctgatccagatgccaatcttcctggcgttgtactacatgctg
atgggttccgttgaactgcgtcaggcaccgtttgcactgtggatccacgacctgtcggca
caggacccgtactacatcctgccgatcctgatgggcgtaacgatgttattcattcagaag
atgtcgccgaccactgtgaccgacccgatgcagcagaagatcatgacctttatgccggtc
atcttcaccgtgttcttcctgtggttcccgtcaggtctggtactgtactatatcgtcagc
aacctggtaaccattattcagcagcagctgatttaccgtggtctggaaaaacgtggcctg
catagccgcgagaagaaaaaatcctga
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