Shigella flexneri 2457T (serotype 2a): S4269
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Entry
S4269 CDS
T00128
Symbol
nikA
Name
(GenBank) periplasmic binding protein for nickel
KO
K15584
nickel transport system substrate-binding protein
Organism
sfx
Shigella flexneri 2457T (serotype 2a)
Pathway
sfx02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sfx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
S4269 (nikA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfx02000
]
S4269 (nikA)
Transporters [BR:
sfx02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Nickel transporter
S4269 (nikA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AAP19229
LinkDB
All DBs
Position
complement(4188238..4189812)
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AA seq
524 aa
AA seq
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MLSTLRRTLFALLACASFIVHAAAPDEITTAWPVNVGPLNPHLYTPNQMFAQSMVYEPLV
KYQADGSVIPWLAKSWTHSEDGKTWTFTLRDDVKFSNGEPFDAEAAAENFRAVLDNRQRH
AWLELANQIVDVKALNKTELQITLKSAYYPFLQELALPRPFRFIAPSQFKNHETMNGIKA
PIGTGPWILQESKLNQYDVFVRNENYWGEKPAIKKITFNVIPDPTTRAVAFETGDIDLLY
GNEGLLPLDTFARFSQNPAYHTQLSQPIETVMLALNTAKAPTNELAVREALNYAVNKKSL
IDNALYGTQQVADTLFAPSVPYANLGLKPRQYDPQKAKELLEKAGWTLPAGKDIREKNGQ
PLRIELSFIGTDALSKSMAEIIQADMRQIGADVSLIGEEESSIYARQRDGRFGMIFHRTW
GAPYDPHAFLSSMRVPSHADFQAQQGLADKPLIDKEIGEVLATHDETQRQALYRDILTRL
HDEAVYLPISYISMMVVSKPELGNIPYAPIATEIPFEQIKPVKP
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgctctccacactccgccgcactctatttgcgctgctggcttgtgcgtcttttatcgtc
catgccgctgcaccagatgaaatcaccaccgcctggccggtgaatgtcgggccactaaac
ccgcacctttacacgcctaaccagatgttcgcccagagcatggtttatgaaccattggtg
aaatatcaggcagacggttcggtgatcccgtggctggcaaaaagctggactcattcagaa
gatggtaaaacctggaccttcaccctgcgtgatgacgtgaaattctccaacggtgaaccg
ttcgatgccgaggcggcggcagaaaacttccgcgcagtgctcgataaccgtcaacgtcac
gcctggctggagctggcaaaccagattgttgatgttaaagcactcaataaaacagagctg
caaattaccctgaaaagcgcctactatcctttcctgcaagaactggccctgccccgtcct
ttccgttttatcgctccctcgcagtttaaaaaccatgaaaccatgaacggaattaaagcg
ccgattggcaccggaccgtggattttgcaggaatcgaaactgaatcagtacgatgtcttc
gtccgtaacgaaaactactggggcgaaaagccagcgattaaaaagatcacctttaacgtc
atcccggacccgactacccgcgcggtggcgtttgaaactggcgatatcgacctgctgtac
ggaaacgaagggttattaccgctcgataccttcgcccgctttagccagaatccggcttac
cacacccaactgtcacagccgatcgaaaccgtgatgctggcgctcaataccgccaaagcc
cccaccaacgagctggcagtacgtgaagctcttaattacgcggtaaacaaaaaatcgctg
attgataacgcgttatatggcacccagcaggtcgccgacaccctgtttgccccttctgtg
ccttacgctaatctcggcctgaaaccgcgccagtacgatccgcagaaagcgaaagagttg
ctggaaaaagccggttggacgctgcctgcgggcaaagacatccgcgagaaaaatggtcag
ccgctgcgcattgaactgtcgttcatcggcaccgatgcgttaagcaaatcgatggcggaa
atcattcaggctgatatgcgccagattggcgcagatgtctcgctgattggcgaagaagag
agcagtatctatgctcgtcagcgcgacggtcgttttggcatgattttccaccgcacctgg
ggcgcgccatacgatccacacgccttcctgagttcaatgcgcgtaccgtcgcacgctgac
ttccaggcacagcaaggattagccgacaagccgctgattgataaagagatcggcgaagtg
ctggcgacccatgacgaaacgcaacgtcaggcgctgtatcgcgacattctgacccgtctg
catgacgaggcggtttatctgcctatcagctacatctcgatgatggtggtatcaaaaccg
gagctgggtaatatcccctacgcgccgatcgccaccgaaattccgttcgaacagattaaa
ccggtgaaaccttaa
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