Shigella flexneri 2457T (serotype 2a): S4525
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Entry
S4525 CDS
T00128
Symbol
ytfR
Name
(GenBank) putative ATP-binding component of a transport system
KO
K10820
galactofuranose transport system ATP-binding protein [EC:
7.5.2.9
]
Organism
sfx
Shigella flexneri 2457T (serotype 2a)
Pathway
sfx02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sfx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
S4525 (ytfR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfx02000
]
S4525 (ytfR)
Enzymes [BR:
sfx01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.9 ABC-type D-galactofuranose transporter
S4525 (ytfR)
Transporters [BR:
sfx02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Galactofuranose transporter
S4525 (ytfR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_ATPase
SMC_N
AAA_29
AAA_22
AAA_16
AAA_23
RsgA_GTPase
AAA_30
TsaE
MMR_HSR1
nSTAND_NTPase5
DUF2813
AAA_15
FeoB_N
DLIC
AAA_27
DUF815
Motif
Other DBs
NCBI-ProteinID:
AAP19466
UniProt:
A0A9P2IW28
LinkDB
All DBs
Position
complement(4428138..4429640)
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AA seq
500 aa
AA seq
DB search
MTTDQHQEILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGENGAGKSTLIKALTGVYH
ADRGTIWLEGQTISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPKRFGLLRRK
EMEKRATELMASYGFSLDVREPLNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQE
MELLFGLMRQLRDRGVSLIFVTHFLDQVYQVSDRITVLRNGSFVGCRETRELPQIELVKM
MLGRELDTHALQRAGRTLLSDKPVAAFKNYGKKGTIAPFDLEVRPGEIVGLAGLLGSGRT
ETAEVIFGIKPADSGTALIKGKPQTLRSPHQASVLGIGFCPEDRKTDGIIAAASVRENII
LALQAQRGWLRPISRKEQQEIAERFIRQLGIRTPSTEQPIEFLSGGNQQKVLLSRWLLTR
PQFLILDELTRGIDVGAHAEIIRLIETLCADGLALLVISSELEELVGYADRVIIMRDRKQ
VAEIPLAQLSVPAIMNAIAA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgaccaacaccaggagatcctccgcaccgaaggattaagtaaatttttcccc
ggcgtcaaagcgttagacaacgttgatttcagcctgcgccgtggcgaaatcatggcgctg
cttggtgaaaacggggcgggaaaatcaacgctaatcaaagcattaactggtgtataccac
gccgatcgcggcaccatctggctggaaggccagactatctcaccgaaaaataccgcccat
gcacaacaactcggtatcggcaccgtctatcaggaagtcaacctgctacccaatatgtcg
gttgctgataatctattcataggtcgcgaacccaaacgtttcggccttctacgccgtaaa
gagatggaaaagcgcgccaccgaactgatggcatcttacggtttctccctcgacgtgcgc
gaaccgcttaaccgtttttcggtggcgatgcagcaaatcgtcgccatttgccgggctatc
gatctctccgccaaagtgctgatcctcgatgaacccaccgccagcctcgacacccaggaa
atggagctattatttggcctgatgcgtcagttgcgcgatcgcggcgtcagcctgatcttt
gtcactcactttctcgatcaggtctatcaggtcagcgatcggatcaccgtcttacgcaac
ggcagtttcgtaggctgtcgggaaacgcgcgagctaccgcagatcgaactggtaaaaatg
atgctggggcgcgagctggatacccacgcgctacagcgtgccgggcgaacattgttgagc
gacaaacccgttgccgcgttcaaaaattacggcaaaaaaggaacgatagcaccgtttgat
ctcgaagtgcgccccggcgagatcgtcggtctggctggcttgctgggatccggacgtacc
gaaaccgccgaagtgatcttcggtatcaaacctgctgacagcggcacggcgttgatcaaa
ggcaaaccgcaaaccctgcgatcgccacatcaggcttcagtactgggcatcggattctgc
ccggaagacaggaaaaccgatggcatcatcgccgccgcctcggtgcgggaaaatatcatc
ctcgctctccaggcccagcgcggctggctacgacccatttcccgcaaagagcagcaagag
attgccgaacgctttatccgccagcttggcattcgcacaccttcaactgaacaaccgatt
gaatttctctccggtggcaatcagcaaaaagtgctgctttcacgttggctactgacccga
ccgcaatttctgatccttgatgagctaacccgtggcattgatgttggtgcccacgccgag
atcatccgcctgattgaaacgctgtgtgctgacggtctggcgctgctggtgatctcctcc
gaactggaagagctggtgggctatgccgaccgggtgatcatcatgcgcgatcgcaaacag
gtggcggagatcccgctggcacagctttccgttccggcgatcatgaacgccattgcggcg
taa
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