Streptomyces fagopyri: GFH48_07490
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Entry
GFH48_07490 CDS
T06986
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sfy
Streptomyces fagopyri
Pathway
sfy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GFH48_07490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfy03400
]
GFH48_07490
Enzymes [BR:
sfy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GFH48_07490
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GFH48_07490
DNA repair and recombination proteins [BR:
sfy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GFH48_07490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Zn_ribbon_RRN7
Zn_ribbon_8
NFACT_N
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
QFZ73126
UniProt:
A0A5Q0L8R1
LinkDB
All DBs
Position
complement(1735635..1736495)
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AA seq
286 aa
AA seq
DB search
MPELPEVEALKDFLADHLVGREVVRVLPVAISVLKTYDPPVTAFEGREVTAVRRRGKFLD
IEADGLHFVTHLARAGWLQWRDPLPDGPPRPGKGPLALRVALENGEGFDLTEAGTQKRLA
VHVVRDPQEIPGVARLGPDPLAADFDEARFAGLIEGERRRLKGALRDQSLIAGVGNAYSD
EILHAARMSPFKLASSLTPEETGRLYEALRGTLTEAVERSRGLAAGRLKREKKSGLRVHG
RTGEPCPVCGDTIREVSFSDSSLQYCPTCQTGGRPLADRRMSRLLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgccagaggtcgaggcgctcaaggacttcctggccgaccatctcgtcggc
cgcgaggtcgtgcgcgtcctgcccgtcgccatcagtgtcctgaagacctacgacccgccc
gtcaccgccttcgagggtcgtgaggtcaccgccgtgcgccggcggggcaagttcctcgac
atcgaggccgacggactgcacttcgtgacgcacctggcccgcgcgggctggctgcagtgg
cgggacccgttgcccgacggcccgcccagaccgggcaagggcccactggcgctgcgtgtc
gccctggagaacggggagggcttcgacctcaccgaggcgggcacccagaagagactcgcg
gtccacgtggtccgggacccgcaggagatcccgggcgtggcgcgcctgggccccgaccca
ctcgcggccgacttcgacgaggcacggttcgcggggctgatcgagggggagcggcgccgc
ctcaagggagccctccgggaccagagcctgatcgcgggcgtggggaacgcgtacagcgac
gagatcctgcacgccgccaggatgtcccccttcaagctcgcctcctcgctgacgcccgag
gagaccggccgcctgtacgaggcgctgcgtggcacgctcaccgaggcggtggagcgctcc
cgcgggctggccgcgggccgtctcaagagggagaagaagagcgggctgcgggtgcacggc
aggacgggcgagccctgtccggtgtgcggcgacaccatccgcgaggtgtccttcagcgat
tcctcgctgcagtactgcccgacctgtcagacgggcggcaggccgctggccgaccgccgg
atgtcccgcctgctcaagtag
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