Streptomyces fagopyri: GFH48_09475
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Entry
GFH48_09475 CDS
T06986
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sfy
Streptomyces fagopyri
Brite
KEGG Orthology (KO) [BR:
sfy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfy03021
]
GFH48_09475
Transcription machinery [BR:
sfy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GFH48_09475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
DUF7343
HTH_Crp_2
HTH_24
HTH_23
GerE
MarR
MarR_2
HTH_Tnp_ISL3
LexA_DNA_bind
HTH_15
HTH_3
HTH_28
DUF4423
Motif
Other DBs
NCBI-ProteinID:
QFZ73454
UniProt:
A0A5Q0L9G5
LinkDB
All DBs
Position
complement(2190073..2190867)
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AA seq
264 aa
AA seq
DB search
MGNRVSAKRHPHDDAPDTMEAFRRLAALPAGSARDALREEIVEAWLPMADRLAGRFRNRG
ENLEDLRQVAALGLVKAVDRYDPELGNAFESYAVPTVTGEIKRHFRDHMWTVHVPRRVQD
LRNRVRFAQQELSGTVSGHAPTVAEIAEHARMTEEDVRAGLEALESFSALSLDAELRGND
DGYSLSDALGSADPALDVVIDREAVKPRLRALPERERTILYMRFFGDMTQSSIAEQLGIS
QMHVSRLISRCCARLRNQVLRDAA
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaccgagtgagcgcgaaacgccacccgcacgacgacgcccccgacaccatggag
gcgttccgcaggcttgccgcactccccgcggggagtgcgcgcgacgcgctccgcgaggag
atcgtcgaggcctggctgcccatggcggaccggctcgcgggccgcttccgcaaccgtggt
gagaacctggaggacctgcggcaggtggcggcgctcggcctggtcaaggccgtcgaccgg
tacgaccccgaactcgggaacgccttcgagagctacgccgtgccgacggtgaccggtgag
atcaagcgccacttccgcgaccacatgtggaccgtccatgtcccgcgccgagtccaggac
ctgcgcaaccgcgtgcggttcgcccagcaggaactgtcggggaccgtgtcgggacacgcg
cccaccgtcgccgagatcgccgaacacgcccggatgaccgaagaggacgtccgggccgga
ctggaggcgctggagagcttcagcgcgctctccctcgacgccgaactccggggcaacgac
gacgggtactcactcagcgacgccctcggctcggccgaccccgccctcgacgtggtgatc
gaccgggaggccgtcaagccccgcctgcgcgccctgcccgagcgtgaacgcaccatcctc
tacatgcggttcttcggcgacatgacccagagcagcatcgccgagcagctcggcatctcg
cagatgcacgtctcccggctgatcagccgctgctgcgcgcggctgcgcaaccaggtcctg
cgcgacgcggcgtaa
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