Streptomyces fagopyri: GFH48_11415
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Entry
GFH48_11415 CDS
T06986
Name
(GenBank) type IV secretion protein Rhs
Organism
sfy
Streptomyces fagopyri
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
T7SS_signal
DUF6531
TEN_YD-shell
RHS
DUF4595
Motif
Other DBs
NCBI-ProteinID:
QFZ73772
UniProt:
A0A5Q0L9N6
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All DBs
Position
2646731..2651497
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AA seq
1588 aa
AA seq
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MGIGDFISDITPDSVENAVEDGVEWAGNRVEDAGNWTADRLDDAGWQSGADWVREQSRSV
ANRMGAEVDEMDLGQTEDKAKLIYGSPGKINATAEKLRAFETSFNGTGDGLRGLDSSRLK
GETAEALRKAVATQPRRWYAAGEACVKAISALDAFAGTVTWAQGQAQVAIDKWKEGVKAS
EDAADAHRKKVDDYNGAVDRYNAQPADKRDPASLPARPATTFDDPGKKLMKDAQDILAEA
RKQRNSAAETARSAVRAARDMAPEKPSYAQQASDGLQELQIMSDHVGGGLVKGTAGLLNF
VRSVDPTDPYNLTHPAEYLTSLNSLAAGLVVAANDPVGTGTQMVKDFMKDPAEGFGRLIP
DIVLTVATDGGGAAVKGARAAEDAAEAARLRRLVDDAPDGTHHRPDGERLTDGTDPVDLA
SGRMFLPQTDLAIPGILPLVFTRRTESGCATGRFLGPAWSSTVDERLEIDAIGVVHVTAD
GLLVPYPHPVPGLPTRPCSGRFRTLLSRDADGDYTLTGPDAGPTRHFTAPPGVDTGGDGT
AWLSGITDRGGHTVTVDRTEDGLPLALVHSAGHQVRLSTADGRVTALSLSGAGENGADLP
VLGYGYEDGDLTTVTRPSGAVTTFLYDDRRRVIAWTDSNGHRYDYVYDDHDRVVAEGGEA
GHVQITLAYTGPDAGTGHRTTVLTTADGRATRHLIGRGCRVLATTDALGRTTRFRYSTGG
ELLSRTDPLGATTAYTYNEDGRLLTVTGPDGGELRVVRGPFGLPVETVGPDGSRTAHTYD
EFGNRTSLIDPAGHTTRMSYDDAGRLTAVTDALGNTTRVRCDAAGRTVAVTDPSGATTRT
ERDGLGRPVRTTDRTGGVTRLEWNADGRLARRTGPDGANESWTYDGEGNCTAHTDAVGAV
TRYEYTHFDLPLATTRPDGGRYEFEHDADLRLTRVTGPRGPSWTYEYDAVGNIVSETDFD
GRTLTYRVDAAGRLTARTDVLGGTISFERDPLGQVLGKTVDGRVTTYVYDRAGRLLEAAG
PDGDLRYRYDRAGRVKTELVDGRPMLYSYDAQGRRVRRTTPTGHVTSYAYDSDGLPCRLD
TGGQRITFTHDAAGRELARVFGDALTVTSAWDEAGRLATQHFTAGARAVNSRAYAYRADG
HLLSVADRLSGTRTFDLDPMGRVTAVHAPAWTERYAYDDTGNQTSASWPDTHPGSESTGP
RSYDGTRVTRAGDVRFEYDALGRVTLRQKTRLSRKPDTWRYEWDTENRLTSVTTPDGTRW
RYRYDPLGRRTAKQRLAADGASVAEETRFTWDGLTLCEQTSHGMDQPNPVALTWDHRGHI
PLAQTERILTADDRQSEIDRRFFAIATDLVGTPTELIDESGGIAWRSRSTLWGATAWARD
GITYTPLRFPGQYYDSETGLHYNFFRHYDPETGRYTSPDPLGLAPAPNPVSYVDNPNTAS
DPLGLMPKYTKEEKAQKRIDKILDDVAERAEKGEINKHPKYHGDTRHGFTDERVLEILKE
PDAVYQSSGQAGNFIYRKDNDIAVVYGPGSKQGQVITAYGDSGIKGESGFRALGGSPTDP
GLPVTHEDIVQGRIPSEDGFLAPAEQIR
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
gtgggcataggcgacttcatcagcgacatcacgcccgactccgtcgagaacgcggtcgag
gacggcgtcgagtgggcgggcaaccgggtcgaggacgcgggcaactggaccgccgaccgg
ctggacgacgccggctggcagtccggcgcggactgggtacgtgagcagtcccgttcggtc
gccaaccggatgggcgccgaggtcgacgagatggacctcgggcagaccgaggacaaggcc
aagctgatctacggcagtccgggcaagatcaacgccaccgccgagaagctccgcgccttc
gagacctccttcaacgggaccggcgacggtctccgcggcctcgactcgtcccggctcaag
ggggagacggccgaagcgctgcgcaaggccgtggcgacccagccgcgcaggtggtacgcc
gccggcgaagcctgcgtgaaggcgatcagcgcgctcgacgcgttcgccggcacggtgacc
tgggcgcagggacaggcccaggtggcgatcgacaagtggaaggagggtgtcaaggcgtcc
gaggacgcggccgacgcccaccggaagaaggtcgacgactacaacggcgccgtcgaccgc
tacaacgcccagcccgctgacaagcgcgaccccgcctcccttccggccaggcccgcgacg
acgttcgacgaccccggcaagaagctcatgaaggacgcccaggacatcctcgccgaggcc
cgcaaacagcggaactcggcggcggagaccgcgcgttcggcagtccgcgccgcccgcgac
atggctccggagaagccgtcctacgcgcagcaggcgagcgacgggctccaagagctgcag
atcatgagcgaccacgtcggcggtggtctcgtcaagggcacggcggggctgttgaacttc
gtccgcagcgtcgacccgacggatccgtacaacctcacgcacccggccgagtacctcacg
tccctgaacagtctcgccgccggtctggtcgtggccgcgaacgacccggtcggcaccggc
acccagatggtcaaggacttcatgaaggacccggccgagggtttcggccggctgataccc
gacatcgtgctgaccgtggccaccgacggcggcggagcggcggtgaagggcgcgcgcgcc
gccgaggacgccgccgaggccgcgcggctgcgcaggctcgtcgacgacgcccctgacggg
acccaccaccggccggacggcgagcgcctcaccgacggcaccgacccggtggacctcgcc
tcgggccggatgttcctgccccagaccgacctcgcgatacccggcatcctgccgctggtc
ttcacccgccgcaccgagtccggctgcgcgaccggacgcttcctggggccggcctggtca
tcgaccgtcgacgaacgcctggagatcgacgcgatcggtgtcgtccacgtcaccgccgac
gggctgctcgtcccgtacccgcatccggtgcccggcctgcccacccggccgtgctcgggc
cggttccgcacgctcctctcccgggacgccgacggcgactacacgctcaccggccccgac
gccggtccgacccgtcacttcaccgccccgcccggcgtcgacacgggcggcgacggcacg
gcctggctgtccggcatcaccgaccggggcggccacaccgtcacggtggaccggaccgag
gacggtctgccgctggccctcgtccactcggcgggccaccaggtgcggctgtccaccgcc
gacggccgggtcaccgccctgtccctgtccggcgcgggcgagaacggcgcggacctgccg
gtgctgggctacggctacgaggacggcgacctcaccaccgtcaccaggccttccggcgcc
gtcaccaccttcctctacgacgaccgccgccgcgtcatcgcctggacggactccaacggc
caccgctacgactacgtctacgacgaccacgaccgcgtcgtcgccgagggcggagaggcc
ggccacgtccagatcaccctggcctacaccgggccggacgccgggaccggccaccggacg
accgtgctgaccaccgccgacggccgggccacccgccacctgatcggccgcggctgccgc
gtcctggccaccaccgacgcgctcggccgcacgacccggttccgctacagcaccggcggc
gaactgctctcccgtaccgacccgttgggcgccaccaccgcctacacgtacaacgaggac
ggcagactgctcacggtcaccgggccggacggcggcgaactacgcgtcgtccgggggccg
ttcggcctgccggtggagaccgtgggaccggacggctcccgcacggctcacacctacgac
gagttcggcaaccgcacgtcgctcatcgatccggccggacacaccacccgcatgtcctac
gacgacgccggacggctcaccgcggtgaccgacgccctcgggaacacgacgcgcgtcagg
tgcgacgcggcgggacggaccgtggcggtgaccgatccgtccggcgccaccacccgcacc
gagcgggacgggctcggccgcccggtccgtacgaccgaccggacgggcggcgtcacccgc
ctcgagtggaacgcggacggccgactcgcccgccgcaccggcccggacggtgcgaacgag
tcatggacctacgacggcgagggcaactgcacggcccacaccgacgccgtcggagccgtc
acgcgctacgaatacacccacttcgaccttccgctcgccaccacccgtcccgacggcggc
cgttacgagttcgagcacgacgccgacctccgcctcacccgggtcaccggcccgcggggc
ccgagctggacgtacgagtacgacgcggtcggcaacatcgtctccgagaccgacttcgac
ggacgcaccctgacctaccgggtggacgccgccggccgtctcaccgccaggaccgacgtc
ctcggcggcaccatctccttcgagcgcgacccactcggccaggtgctcggcaagaccgtc
gacggccgggtgacgacctacgtgtacgaccgggcgggccgactcctggaggcggcagga
cccgacggcgatctgcgctaccggtacgaccgcgcagggcgcgtcaagacggaactggtg
gacggccgcccgatgctctactcctacgacgcccagggccggcgcgtccgtcggaccacc
cccaccggccatgtcacgtcctacgcctacgactccgacggcctcccctgccgactggac
acgggtggacagcgcatcaccttcacccacgacgccgcgggccgcgaactggcccgtgtc
ttcggggacgcgctcaccgtgacgtcggcctgggacgaggccggccggctcgccacgcag
cacttcaccgccggagcccgcgccgtcaacagccgtgcctacgcctaccgcgccgacgga
cacctgctctccgtcgccgaccggctttccgggacccgtacgttcgacctggatccgatg
ggccgggtgaccgccgtccacgccccggcctggacggagcggtacgcgtacgacgacacg
ggcaaccagacgtccgcctcctggcccgacacccaccccggcagcgagtcgaccggcccc
cgctcgtacgacggcacccgtgtcacccgcgccggcgacgtccgcttcgagtacgacgcc
ctcggccgcgtcaccctgcgccagaagacccgtctgtcccgcaagcccgacacctggcgc
tacgagtgggacacggagaaccgcctcacctccgtcaccacccccgacgggacccggtgg
aggtaccgctacgacccgctgggccgtcgtacggccaagcagcgcctggcggcggacggc
gcgagcgtggccgaggagacccgcttcacctgggacggcctgaccctgtgcgaacagacc
agtcacggcatggaccagccgaacccggtggccctcacctgggaccaccgcggccacatc
cccctggcgcagaccgagcgcatcctcaccgccgacgaccggcagagcgagatcgaccgc
cgcttcttcgccatcgccacggacctggtcggcacccccaccgaactgatcgacgagtcc
ggcggcatcgcgtggcgctcccggtccacactgtggggcgccaccgcgtgggcccgcgac
ggcatcacgtacacccctctccgcttccccggccagtactacgactccgagaccggcctc
cactacaacttcttccggcactacgacccggagaccgggcgctacacctccccggacccc
ctcggcctcgctcccgcgccgaaccccgtcagctacgtggacaacccgaacaccgcgtcg
gacccgttgggtctgatgcccaagtacacgaaggaggagaaggcccagaagcggatcgac
aagatcctggacgacgtcgccgagagggcggagaagggggagatcaacaagcatcccaag
taccacggggacacgcgccacggtttcaccgacgaacgggtcctggagatcctgaaggag
cccgatgccgtgtaccagtcatcgggtcaggcaggaaacttcatctaccggaaggacaac
gacatcgccgtggtctacggaccgggctccaagcaggggcaggtgatcacggcctacgga
gattcgggcatcaagggcgagtccggattcagggcgctcggcggcagtccgacggacccc
ggactcccggtgacccacgaggacatcgtgcagggcagaattccctccgaggacgggttc
ctggccccggcggagcagatcagatga
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