Streptomyces fagopyri: GFH48_14480
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Entry
GFH48_14480 CDS
T06986
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
sfy
Streptomyces fagopyri
Pathway
sfy03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
GFH48_14480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfy03400
]
GFH48_14480
DNA repair and recombination proteins [BR:
sfy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
GFH48_14480
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QFZ74299
UniProt:
A0A5Q0LCS9
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All DBs
Position
complement(3357677..3358819)
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AA seq
380 aa
AA seq
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MLHVRSIWNGAISFGLVSIPIKLVNATESHSISFRQVHLDDGGRIRYRKFCELEDREVTG
GEIGKAYEDGDGSLIPVTDEDLASLPIPTTRTIEIVAFVPADRIDPLQMDTAYYLSANGV
PATKPYILLREALKRSQKVAIAKFALRGRERLGMLRVVDDVIAMHGLLWPDEIRGTDEVA
PDASVTVRDQELDLADALMDTLGEVDLADLHDDYREAVEELIAAKASGEQAPAAPAGEKA
GGKVLDLMAALEKSVRAAKESRGEETGGATGARAGERTGGKAGESGGSGGSGEVTPLPAR
RSARTAPKAVGGKKSTSTAKKTAAKKTAKRTTAKQTSGTTARTATKSTSERATKGAAKKT
AAKKNAATAKKATPRKRASA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcacgtgcgatccatctggaacggcgccatctccttcgggctggtcagcatcccg
atcaagctcgtgaacgccacggagagccactcgatctccttccgccaggtccacctcgac
gacggcggccgcatccggtaccggaagttctgcgaactggaggaccgcgaggtcacaggg
ggtgagatcggcaaggcgtacgaggacggcgacggttcgctgatccccgtcacggacgag
gacctggcctcgctgccgatcccgaccaccaggacgatcgagatcgtggccttcgtaccg
gccgaccggatcgacccgctgcagatggacacggcctactacctgtccgcgaacggcgtc
cccgccaccaagccgtacatcctgctgcgcgaggccctcaaacgcagccagaaggtcgcc
atcgcgaagttcgcgctgcgcggacgcgagcggctcgggatgctgcgggtggtggacgac
gtgatcgccatgcacgggctgctgtggccggacgagatccgcggtacggacgaggtggcc
cccgacgcgagcgtgaccgtacgcgaccaggaactcgacctggccgacgccctcatggac
accctcggggaggtcgacctcgcggacctgcacgacgactaccgggaggccgtggaggag
ctgatcgcggccaaggcctccggcgaacaggcgccggccgcgcccgcgggggagaaggcg
ggcggcaaggtgctcgacctgatggccgccctggagaagagcgtgcgcgcggccaaggag
tcccgcggcgaggagacgggcggggcgacgggcgcgagagcgggggagcggaccggcggg
aaggccggggagagcggcgggagcggcgggagcggcgaggtcaccccgctcccggcccgc
aggtcggcccgtacggcgccgaaggcggtcggcgggaagaagtccacgtcgaccgcgaag
aagacggcggcgaagaagacggcgaagaggaccacggcgaagcagacctccgggaccacc
gcccggacggccacgaagtcgacgtccgagagggccaccaagggcgcggccaagaagacg
gccgccaagaagaacgccgcgaccgcgaagaaggcgacgccccgcaagcgcgcctccgcc
tga
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