Streptomyces fagopyri: GFH48_14825
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Entry
GFH48_14825 CDS
T06986
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sfy
Streptomyces fagopyri
Brite
KEGG Orthology (KO) [BR:
sfy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfy03021
]
GFH48_14825
Transcription machinery [BR:
sfy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GFH48_14825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF7343
MarR_2
HTH_24
Sigma70_ECF
NirdL-like_HTH
MarR
IF2_N
HTH_3
PF0610-like_N
HTH_Crp_2
GerE
HTH_AraC
HTH_ParB
Motif
Other DBs
NCBI-ProteinID:
QFZ74360
UniProt:
A0A5Q0LBE4
LinkDB
All DBs
Position
3429525..3430715
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AA seq
396 aa
AA seq
DB search
MREGDGPVRDEERGTRELPAGPVDGLDAPRRVAEGVDGIPEQARPHPDDGTASRAGDPPS
PNEAENAGVAPVDEDGQEKLPGRDDGQRDPEGAARSTSSEGRRLVTGGTMSEQEQHDKTA
AQNVQSVQATQHGPSVQHIHHDPKDPQDRSGARAMFIELRKLPDGSAEYAELRNQLVRMH
LPLVEHLARRFRNRGEPLDDLTQVATIGLIKSVDRFDPERGVEFSTYATPTVVGEIKRHF
RDKGWAVRVPRRLQELRLALTTATAELSQQHGRSPTVHELAEKLAISEEEVLEGLESANA
YSTLSLDVPDTDDESPAVADTLGAEDEALEGVEYRESLKPLLEDLPPREKRILLLRFFGN
MTQSQIAQEVGISQMHVSRLLARTLAQLREKLLVEE
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
gtgagggagggggacgggccggtgcgggacgaagagcgcggcacacgggagcttcccgcc
gggcccgtcgacggcctcgacgcgccgcggcgcgtggcggagggcgtcgacggcatcccc
gagcaggcccggccgcacccggacgacggcacagcctcccgggccggggatccccccagc
ccgaacgaagccgagaacgcgggggtcgcaccggtcgacgaggacggacaggagaagctc
cccggccgtgacgacggacaacgggatccggagggtgccgcgcggagcacgtcctcggaa
gggcggcggctggtgacgggcgggactatgagcgagcaagaacaacacgacaagacggct
gcgcagaacgtgcagagcgtgcaggccacgcagcacgggcccagcgtccagcacatccat
cacgacccgaaggacccgcaggaccgcagcggagcgcgggcgatgttcatcgagctgcgc
aagctgccggacggcagcgccgagtacgcggagctgcgcaaccagctggtccgcatgcac
ctcccgctcgtcgagcacctcgcgcgccgcttccgcaaccgcggggagccgctggacgac
ctgacccaggtcgccaccatcggcctgatcaagtcggtcgaccggttcgacccggagcgc
ggcgtcgagttctcgacgtacgcgacccccacggtcgtcggcgagatcaagcgccacttc
cgcgacaagggctgggcggtccgcgtgccgcgccgcctccaggaactgcgtctcgcgctc
accacggcgaccgcggaactctcccagcagcacggacgttcccccacggtccacgaactc
gccgagaagctggccatctcggaggaagaggtcctggagggcctggagtccgccaacgcc
tactccacgctgtccctggacgttcccgacacggacgacgagtccccggccgtcgccgac
acactcggcgccgaggacgaggccctggaaggggtcgagtaccgggagtcactgaagccg
ctgctggaggatcttccgccgcgagagaagcggatccttctccttcgcttcttcggcaac
atgacccagtcgcagatcgcccaggaggtcggcatctcccagatgcacgtctcccgtctt
ctcgcccgcaccctcgcccagctccgcgagaagctgctggtcgaggagtag
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